Gene Aaci_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0590 
Symbol 
ID8424081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp640696 
End bp641379 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID645026709 
Productdiguanylate phosphodiesterase 
Protein accessionYP_003184027 
Protein GI258510593 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGTC TCTTAACGGT GTACTTTCAA CCCATCTGGG ACTTGTGGAC GCGCACGGTG 
GTGGGGTATG AGGCGCTCGT TCGGGGGCAA CGGGCAGATC GAGTGATCTC GGCGCATGAG 
GTGTTTCGGG AGGCTGGTGA ACACGGCGGG GCCGTGGCGG TCGACGCGGA GGCGCGGCGC 
ATGGCGCTCG AACGGCTGTC CTATCTGCCG CAGGAGACAC GACTGTTCGT GAACCTGCTG 
CCGAAGACGG TGGAGACGAT CGCGCCCCAT CTTTGGTTTC CGCGCGGCGC GCGTCTGGAG 
CGCATCGTCG TCGAGGTCTC CGAGCGCACC AAGCGCGCGG AGCGGTTACA ACAAGGGCTC 
ACGCCCCTTC GCCTCCATGG CCTTCAGGTG GCGCTGGATG ATTACGGCGT GGAACGCACC 
AACCTGCACC TGCTCGAGGT CTTGCAGCCG GAGTGGATCA AGCTGGACCT GTCGTTTGTG 
CGGGAGGGAC GCTGGGAGTT GATTCGCAGC TTGCGACGGT TCGTCGAGGA TTGGCCTGGA 
ATGCACCTGA TTGTAGAGGG CGTCGAGTCC AAGGTGGACA TTGAGCGCTG TCTGGACGCC 
GGCGTGCGGT ACATGCAGGG GTTCGCGCTC GGGATCCCGC TGCCGTTGAC AGACGCCCTC 
CGCGTCGAGG TGGATCCCAG ATGA
 
Protein sequence
MSSLLTVYFQ PIWDLWTRTV VGYEALVRGQ RADRVISAHE VFREAGEHGG AVAVDAEARR 
MALERLSYLP QETRLFVNLL PKTVETIAPH LWFPRGARLE RIVVEVSERT KRAERLQQGL 
TPLRLHGLQV ALDDYGVERT NLHLLEVLQP EWIKLDLSFV REGRWELIRS LRRFVEDWPG 
MHLIVEGVES KVDIERCLDA GVRYMQGFAL GIPLPLTDAL RVEVDPR