| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0544 |
|---|
| Symbol | |
|---|
| ID | 8424034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 602372 |
|---|
| End bp | 603001 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645026665 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003183984 |
|---|
| Protein GI | 258510550 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA CACTGGTATT TGCGGCAAAG CGCGGCGACC AGGACGCTTT CGCCGTACTC
TATCGTGAAT TCCGAGTCAG GGTCTGGAGT TGGATACGAA ACTACTGGAT ACCCGGAGCC
GACCGCGAGG ATCTGATGCA GCACGCGTGG ATCGGGTTCT GGGAGGCCAT ACGAGACTAC
GACGTTCGCG GTAAAGTGCC GTTTCTGGCG TTTGCGAAGA TGTGCGTCGT GCGCGAGATC
CAAACGGTGC TGCGGATGGC GCGCAGGCAA AAGCACACAA CACACTTGAC AGCGCTGTCG
CTTGACGCGG AGTGCCCATG GATCGAGGAC GCAGAACGCA CGGTGCTGGA CGTGCTCGTT
GATCGTACGG CACCGAGTGT GGAGGATGTG GTGTTCGGGC CGCCTAAGGG TGTATCTGCG
GAAGAGCTCG TGGCATGGGC TGAGCGGCAT TGGAGACTTA ACTTGTCGGA GCTCGAACGC
GAGGTGTGGC GGTTGCGGAT CGAGGGTCAT TCGTACACGG AGATCCAGCG GATGTTGGGA
TGCGGATACA AGGCGGTGGA CAATGCGGTG CAGAGGTTAA GGAAAAAAGC GCGAAGGGCA
CTCATGCGCC AGGAAGGAGC GGCGTTGTGA
|
|---|
| Protein sequence | MDTTLVFAAK RGDQDAFAVL YREFRVRVWS WIRNYWIPGA DREDLMQHAW IGFWEAIRDY
DVRGKVPFLA FAKMCVVREI QTVLRMARRQ KHTTHLTALS LDAECPWIED AERTVLDVLV
DRTAPSVEDV VFGPPKGVSA EELVAWAERH WRLNLSELER EVWRLRIEGH SYTEIQRMLG
CGYKAVDNAV QRLRKKARRA LMRQEGAAL
|
|---|
| |