Gene Aaci_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0454 
Symbol 
ID8423944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp522556 
End bp523968 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content63% 
IMG OID645026583 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003183902 
Protein GI258510468 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGTCG GAGATATTGT GGAAGAGGTT GAGGTCCTCG TCATTGGCGC AGGCCCTGGC 
GGTTACGTGG CAGCCATTCG GGCTGCGCAG CTCGGGAAGT CGGTCACCAT TGTGGACAAG
GCCGAGCTGG GCGGCGTGTG CCTGAACCGC GGTTGCATTC CTTCCAAGGC GCTCATCTCG
GCCGCCCATC ACTACGAGGC GGCCAAGGAG TCGCCGTTCC CGGGCATCGA GACGACCGCA
ACCTTCGATT TCAAGAAAGT GCAGGAATGG AAGCAGTCGG TTGTCAAAAA GATGACGAGC
GGCGTACAGC AGCTCCTGAA GGGGAACAAG GTCAACGTCA TCCACGGCGA AGCATTTTTC
ACCAAGCCGA ACGAAGTGCG CGTCATGCAG GAGAACGGCA GCCAGCGGCT GCAGTTCCAA
CACTGCATCC TGGCGACCGG CTCGCGGCCC ATCGAGCTGA AGAATTTGCC GCTTGGCAAG
CGCGTGATTG ACTCGACCGG CGCGCTCTCG CTCGATCACG TCCCGAAGCG GCTGGTCGTG
GTGGGCGGCG GTTACATCGG CATCGAGCTC GGCCAGACGT TCGCCAAGTT CGGAAGCCAG
GTGACCATCA TCGAGGGCCT GGACAGCATC CTCGCGCTCT TTGACAAGCA GATGGTCCGC
CTTGTGGAAA AGAACCTGAA GAAGTACAAC GTGCAGATTG AGACCAACGC GCTCGCGCAG
GGCGTGGAGG AGACCGAGGA CGGCGTCAAG CTCACCTACA AGGACAAAGA CGGCAACGAG
AAGACCATTG AGGCGGACTA CGTCCTCGTG ACAGTGGGTC GCCGCCCGAA CACGGACGAG
ATCGGCCTGC AGGACGCGGG CATCGAGCTG ACGGACAAGG GCCTCGTCAA GGTCGATCAG
CAGTGCCGCA CCACCAACCC GAACGTCTTC GCCATCGGGG ACATCGTGCC TGGCCCGGCG
CTCGCCCACA AGGCGTCGTA CGAAGGCAAG GTGGCCGCGG AGGTCATCGC GGGCAAGCCG
TCCATCGTCG ACTACCGCTG CATCCCGTCC GTCGTCTTCT CGGATCCGGA GATGGCGTCG
GTCGGCCTGA CCGAGGAAGA GGCGAAGAAG GAGTACGGCC AGGTTGCGGT CGGCCGCTTC
CCGTACGCCG CCAACGGGCG TGCGACGGCG CTCAACGCGA CCGACGGCTT CATCAAGCTC
GTCGCCAACA AGGAGAACGG CGTGCTCGTC GGCGCCCAGG TGGTTGGCGT CGAGGCGTCG
AACATCATCG CGGAGCTCGG GCTTGCCATC GAGATGAGCG CAACGCTCGA GGACATCGCG
CTGACCATTC ACGCCCATCC CACGCTCGGA GAGATGGTCA TGGAAGCCGC CGAAGTCGGC
CTCGGCGAGC CGATTCACAT CATCAAGGGA TAA
 
Protein sequence
MVVGDIVEEV EVLVIGAGPG GYVAAIRAAQ LGKSVTIVDK AELGGVCLNR GCIPSKALIS 
AAHHYEAAKE SPFPGIETTA TFDFKKVQEW KQSVVKKMTS GVQQLLKGNK VNVIHGEAFF
TKPNEVRVMQ ENGSQRLQFQ HCILATGSRP IELKNLPLGK RVIDSTGALS LDHVPKRLVV
VGGGYIGIEL GQTFAKFGSQ VTIIEGLDSI LALFDKQMVR LVEKNLKKYN VQIETNALAQ
GVEETEDGVK LTYKDKDGNE KTIEADYVLV TVGRRPNTDE IGLQDAGIEL TDKGLVKVDQ
QCRTTNPNVF AIGDIVPGPA LAHKASYEGK VAAEVIAGKP SIVDYRCIPS VVFSDPEMAS
VGLTEEEAKK EYGQVAVGRF PYAANGRATA LNATDGFIKL VANKENGVLV GAQVVGVEAS
NIIAELGLAI EMSATLEDIA LTIHAHPTLG EMVMEAAEVG LGEPIHIIKG