Gene Aaci_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0444 
Symbol 
ID8423934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp512053 
End bp513501 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content60% 
IMG OID645026573 
ProductPAS modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_003183892 
Protein GI258510458 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAAC TGGCGGCATC GGGCGACGTC CTGCGCCTCA TCCTTGACTC GATGTACGAG 
GGGATCGTGC TCGTCGACGC GAAGGGCCAC ATTGTGGAAA TCAACCAGGC GTATCTCAAA
CTGTTGAATA TGGAACGAGA CAGGGTGATC GGCCGTCACG TGACGGAGGT CATCGAGAAC
ACGAGGTTGC ATCGGGTCGT CGAGACCGGC ATCCCGGAGC GAGGACAACT GCAGCGGATT
CGTCAGCACG ACATGGTAGT GCACCGCATC CCGATCTGGC AAGGCGGCAA GGTCGTCGGC
GCGATCGGCG TCCTCATCTT TGAAAGCATC CGGGATCTCT ACGAGATCAT CGAAAGGCTG
CAGGAACACG CGCCCCAGGT ACCTTCGGCG CGCCCGGAGA CCGAGCAAGG ATCGGAAGCT
CACCAGGTGA GGTGGGCCTA TCGGATCGAC GATTTTCTTG GGCAAAGTCG GGCCGTCTTG
GACCTCCGCA GGATGGCGCG AAAGGCGGCC CAGACGCCCG TGACTGTGCT CATCACCGGG
GAGAGCGGGA CCGGCAAAGA GGTGTTGGCG CAAGGCATTC ATTTTGAAAG CAACAGGGCG
AATGGGCCGT TTATCAGTGT CAATTGCGCA GCCATTCCCG ACAGCCTTCT GGAAGCGGAG
CTTTTCGGCT ACGATGAGGG CGCGTTCACC GGGGCCAAGC GGGGTGGCAA GCCTGGTCAG
ATCGAGCTCG CGCACATGGG AACGCTGTTT TTGGATGAGA TCGGCGACAT GCCACTATCG
ATGCAGGCCA AGCTTCTGCG AGTTTTGGAA GACCGGCAGG TGCAGCGAGT TGGGGGAACC
GTCAAGCGTG AGGTCAACCT GCGCTTGATC TCGGCCACCA ATCGCGATCT CGAGCGAATG
GTGGAGGAGG GGCGGTTTCG CGAGGATCTG TACTATCGGC TGAACATCAT CCGGCTGCAC
ATCCCGCCTC TCAGGGAGCG GAAGGAGGAC ATTCCGCTCC TTCTTGCGCA CTATCTGGAC
ATGACCTGTG AACGGCTGGG CAAACCCCGC ATGCACCTGT CGTCCGAGGT GGTGGAACGG
CTTCTTGCCT ATGACTGGCC CGGCAACGTA CGCGAACTGG TCCACATGGT CGAAGTGCTT
GTGAGCCTAT GCGATTCGGC CTACGTCAGG CTGGACGATT TTCCGCCTCA TCTGCACAAG
CTCTTGCAAG AGCGCTCCTC CCGATCGCCC GCGATCACTC CATCCCGAAG CCCTGCGTGC
GACGCGGTTC CCGGTCCCGC AGTTGGATCG CCGGGAGCCG GTGCAAGGGA GCGAATGATG
CAGGTCGAAC GGGAACTCAT CGAGGCGGCT TTGCGGGAGT CGGGGGGCAA CAAGTCCTTG
GCCGCCAAGC GATTGGGTGT CCACCGCTCG ACGCTGTATG ACAAGATAAA AAAATTAGGA
ATCTTGTGA
 
Protein sequence
MHELAASGDV LRLILDSMYE GIVLVDAKGH IVEINQAYLK LLNMERDRVI GRHVTEVIEN 
TRLHRVVETG IPERGQLQRI RQHDMVVHRI PIWQGGKVVG AIGVLIFESI RDLYEIIERL
QEHAPQVPSA RPETEQGSEA HQVRWAYRID DFLGQSRAVL DLRRMARKAA QTPVTVLITG
ESGTGKEVLA QGIHFESNRA NGPFISVNCA AIPDSLLEAE LFGYDEGAFT GAKRGGKPGQ
IELAHMGTLF LDEIGDMPLS MQAKLLRVLE DRQVQRVGGT VKREVNLRLI SATNRDLERM
VEEGRFREDL YYRLNIIRLH IPPLRERKED IPLLLAHYLD MTCERLGKPR MHLSSEVVER
LLAYDWPGNV RELVHMVEVL VSLCDSAYVR LDDFPPHLHK LLQERSSRSP AITPSRSPAC
DAVPGPAVGS PGAGARERMM QVERELIEAA LRESGGNKSL AAKRLGVHRS TLYDKIKKLG
IL