| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0442 |
|---|
| Symbol | |
|---|
| ID | 8423932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 509134 |
|---|
| End bp | 510600 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645026571 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003183890 |
|---|
| Protein GI | 258510456 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGGA CGTCGTCCGT GAGTGTAGCC GGGCACCTGC GCAATTGGAT CGGCGGCGCG
TGGCGAGACG CGGAAGCCAG CGAATACCTC GACGTCTTCG ATCCGGCGAC CGCGGAGGTC
ATCGCTCAGG TGCCGCTGTC GACACAACAA GACGTGGAAA TGGCTGTGGC GGCGGCTGCG
GAAGCGTTTC GGGAATGGAG CAAGACCCCT GTACCTCGCC GCGCGCGAAT CTTCTTTCGC
TATCAGCAAC TGCTCGTCGA TCATTGGGAC GAACTCGCCC GACTGATCGT CCGCGAGAAC
GGCAAGAGCT ACAAGGACGC CTACGGGGAG GTGCAGCGCG CGATCGAAAA CGTCGAGTTT
GCCGCGAGCG CGCCGACGCT CCTCATGGGA GAACAATTGG CCAATATCGC GACATCCTTG
GACTCGGGCA TGTACCGGTA CCCACTTGGC GTGGTGGCAG GCATCACGCC GTTCAACTTT
CCGATGATGG TCCCTTGCTG GATGTTTCCT CTGGCCATCG TCTGCGGGAA CACGTTCGTG
TTGAAGCCTT CCGAGCGGAC GCCGCTTTTG GCCCAGCGGT TGGCCGAGCT GCTCGAGGAG
GCGGGCCTGC CCTCCGGGGT CCTCAACATT GTGCACGGCG CCCGAGAGGT CGTTCAAGGC
CTGATCGAAC ATCCGACGGT TCGCGCCATC TCGTTCGTCG GATCGCAGCC GGTGGCCGCG
TACGTGTACC GCGAAGCGGC AGCCCACGGC AAGCGCGTGC AGGCGCTGGC AGGCGCCAAG
AATCACACCA TCGTGATGCC GGACGCGGAT CTGGACGAAG CCATCCCCCA GATCATCTCG
GCCGCGTTCG GCTCGGCGGG CGAGCGCTGC ATGGCCTGTT CCGTCGTCGT GGCAGTAGGT
TCCATCGCAG ATCGCCTCGT CGAAGGCCTG AAGTCCGCTG CCGATCAGAT CCGCATCGGC
AACGGCCTAG ACGAAGATGT CCTGCTTGGT CCCGTCATCC GGGCAGAACA TCGAGATCGG
ACGTTGCAGT ACATCGATCT CGGCATCCAG GAGGGCGCGG TCCTTGTGCG CGACGGACGC
CAGGATCGCG TGGATGCAAA CGGGTACTTC GTCGGACCCA CGATTTTCGA TCACGTCCGC
CCTTCCATGA AGATCTGGCA AGACGAGATC TTTGCGCCCG TGCTGTCGGT CGTGCGGGTG
GGCACGCTGG ACGAGGCCAT CGCGTTGGCC AACCGGTCCC GGTTTGCGAA CGGAGCCTGC
ATCTTCACGA ACAGCGCGTC CGCCATTCGC AAGTTCCGCG AGGAAATCGA CGCAGGAATG
CTTGGGGTCA ACATCGGTGT TCCTGCTCCC ATGGCGTTCT TCCCCTTCTC GGGGTGGAAG
GATTCCTTCT ACGGCGATCT GCACGCCAAC GGCAAGGACG GCGTGGCGTT TTACACGCGC
CGAAAGATGA TCACGGCAAG AGTATGA
|
|---|
| Protein sequence | MHRTSSVSVA GHLRNWIGGA WRDAEASEYL DVFDPATAEV IAQVPLSTQQ DVEMAVAAAA
EAFREWSKTP VPRRARIFFR YQQLLVDHWD ELARLIVREN GKSYKDAYGE VQRAIENVEF
AASAPTLLMG EQLANIATSL DSGMYRYPLG VVAGITPFNF PMMVPCWMFP LAIVCGNTFV
LKPSERTPLL AQRLAELLEE AGLPSGVLNI VHGAREVVQG LIEHPTVRAI SFVGSQPVAA
YVYREAAAHG KRVQALAGAK NHTIVMPDAD LDEAIPQIIS AAFGSAGERC MACSVVVAVG
SIADRLVEGL KSAADQIRIG NGLDEDVLLG PVIRAEHRDR TLQYIDLGIQ EGAVLVRDGR
QDRVDANGYF VGPTIFDHVR PSMKIWQDEI FAPVLSVVRV GTLDEAIALA NRSRFANGAC
IFTNSASAIR KFREEIDAGM LGVNIGVPAP MAFFPFSGWK DSFYGDLHAN GKDGVAFYTR
RKMITARV
|
|---|
| |