Gene Aaci_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0439 
Symbol 
ID8423929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp506427 
End bp507551 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content58% 
IMG OID645026568 
Productspore germination protein 
Protein accessionYP_003183887 
Protein GI258510453 
COG category 
COG ID 
TIGRFAM ID[TIGR00912] spore germination protein (amino acid permease) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT CCGGCAGGAG GGACGCGAAG GTACCTGCGG CCGAGATGAC GGCGATGCTG 
ATCATCTTCG TCTCGACCAA CGCCTTTCTC ACGTATCCTC GCTACATCAG TTTCAGCGCG 
TATGAGGCCG CGTGGATGGA GCCCATCTTC TCCGGTGCGC TGACGCTGGC GCTGTTTTAT 
TTGGTGGAAT GGATCATGCG CAGGTACTTT CAAAACCTCG ACATTGTCGA GATCGCGAAG 
GAAGTGTTCG GCCGGTTCGG GGCCATCTGC ATCGCGCTCG TGTTTGCGCT GTATTTCCTT 
TGCTCCACTG CCGCAGTGAT GAGGGAATTC ACAGAAAATG TGGTAAGTAC CGTGCTGCCG 
TCCACGCCAG TGTTGTTGGT TGGGGCAGTG TTCATGTTTG CGGTGGGGTA CATCGCGTAC 
GCCGGCCTTG AGGGCATTTG TCGCACGGCG TTCATTTTCT TGCCGATTCT GCTTGTCGGG 
CTGGTCGGCG TAAACCTGAT GACGGTGAAC TGGTGGCGCC CGTACCTGCT GCTTCCCCTG 
TGGGGCACGG GGCCGGTGCG CGTCATCATG GGCGCCATGC AGTACAGTTC CATCTTCGCC 
AATGTGCTGC TATTGACCAT CATCTTCCCG CACGTCAACA ACCCGCGCAA GATGCGTCGC 
ATTGGCGCAG TGAGCATCAT CGTGTCGACG CTGTTGCTGG TGTTTCTCGT CGTGTCGTAT 
CACATGGTGT TTCCGGCGGC CGAGACCGGG AAGACGTCAT TCGCGCTGTA CCGCTTGGCT 
CGCATGATCC ACATGGGTCC TTTCTTCCAA CGCCTTGAGA GCATCTTTAT CTTCCTGTGG 
GTCACGGCGG CCACCGTTCG CATGGCCGTC ACCATGTGGG GCTCTGCCTA CCTGTTGTCG 
AAGGCGTTCA GCTGGCCCAC GTACCGGCCT GCCGTTCCCG CAATTGTGCT GCTCTCGTTT 
TCGCTCGGCA TGTGGCCGCA GAACTGGATG GACGTGATCG AATTCGACGG CACGTATCTG 
CTCAAGTGGG GGTGGATTGT GGTCTTTGCC ATTCCCGTGG CCGTTCTTCT GAGCGGCTGG 
GCCAAGCGAT CTCGTCGACG GAGCAGGAGG GTGCGGCATG TTTAA
 
Protein sequence
MSQSGRRDAK VPAAEMTAML IIFVSTNAFL TYPRYISFSA YEAAWMEPIF SGALTLALFY 
LVEWIMRRYF QNLDIVEIAK EVFGRFGAIC IALVFALYFL CSTAAVMREF TENVVSTVLP 
STPVLLVGAV FMFAVGYIAY AGLEGICRTA FIFLPILLVG LVGVNLMTVN WWRPYLLLPL 
WGTGPVRVIM GAMQYSSIFA NVLLLTIIFP HVNNPRKMRR IGAVSIIVST LLLVFLVVSY 
HMVFPAAETG KTSFALYRLA RMIHMGPFFQ RLESIFIFLW VTAATVRMAV TMWGSAYLLS 
KAFSWPTYRP AVPAIVLLSF SLGMWPQNWM DVIEFDGTYL LKWGWIVVFA IPVAVLLSGW 
AKRSRRRSRR VRHV