Gene Aaci_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0438 
Symbol 
ID8423928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp504631 
End bp506430 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content60% 
IMG OID645026567 
ProductGerA spore germination protein 
Protein accessionYP_003183886 
Protein GI258510452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.561382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGTGG GAGTTGGAGG CGCGCTGAAA CGGCTGTTGA CCGTCGACGA CACCGTGCTG 
AACGACGATT TCTCCTTGTC GAGCGACGAC GATGACCCGG GTGCTGACAA GTATGGCGAT
GAGCCTGAAA TGGAGTCGGT GAACTTTACG ACGGCGGAAA ACAAGATGGA CACCGCCAAA
AAGCCTGTCT CCATGCGCTC CTTTCTGCGG CGGGCGGGGC GGGAATACGA GGAGGCCGTC
GACAAGGCGC ACGCCGGTCA GCAGGACAAC ATCGAGCTCG ATCTCGACGA CATGAAGCGC
CGCCTTTCCC GCTTCTTTCA CCTGCCACAA AACAAGGACA TTGTGGTTCG CGAGTTCTCG
GTCGGCGTCG AGGGCCGCTC GCCCTGGCGA GGAATGGTCG TCTACGTCGA TGGATTGGTG
GACAAGAACG TCATCAATTG GGCCATCCTC GAACCCCTGA TGGTTTGGTC GCATCTGGCT
GACGATCCGA AGCGAACGCT CTCCTATGTC GTCGATCACC TCGTCCCCGG CCACCAGACG
CAGCTCATCG AGAAGTGGTC CGAGGTGGTG TTCAACGTTC TGGCCGGATC GACCGTCGTG
TTCCTCGACA GGTGCGACGC AGCGTTGGTG GTGGAGTCTA AGGGCTGGGA GCACCGCAGC
GTCGCCACGC CGAAGATGGA GAACGTCGTC CGTGGCTCAC AGGATGCGTT CACAGAAAAC
TTCCGCACCA ACACGGGTCT GGTGCGCATG CGGCTCCGCT CGGAGCATTT GGTGACCGAG
ATTCACGCAG TCGGCAATCT CGCCAAGACG GATGTCGCCA TCATGTACAT TCATGGCATG
ACGAATCCCA AACTCGTCAA GGAGGTTCGC CGGCGCATCG CGGACATCGA CGTCGACTAC
GTGCTCGACG CGGGGATGCT GGAGCAGTTC ATTGAAGATC GGCCGAGCAT GATGATTCCC
CAGGTGCTCG TGACGGAGCG GCCAGATCGC GTCGCGGCGA TGCTGGCGGA AGGATACGTG
GCGATTTTCG TTGGGCATAG CCCGGTTGCG ATCATCGTGC CGGTGGTGCT GTGGTCGTTG
ATGCACACGT CCGAAGACAC CAACCTTCGC ATCATCCCGG GGACGTTTAT CCGCTTTATT
CGCTGGGTCG CCCTGCTCAC AGCTCTGCTG CTTCCTGGAC TGTACATCGC GGTGACGAAC
TATCATTCGG AGATGCTGCC CACGGACCTG ATGTTGGCCA TCGCGGGAAG CCGAGAGCAA
GTGCCGTTTC CGGTGGTGGT CGAGGTCTTG CTGATGGAAT TTGCCATCGA GCTGATCCGC
GAAGCGGGAA TCCGGATCCC CTCGGTCATA GGACCAACAA TTGGAATAGT TGGTGCTTTG
ATCATCGGCC AGTCGGCGGT GCAGGCCGGG ATCGTCAGTC CGCTGCTTGT CATCGTGGTA
GCGACAACGG CGCTCGCGTC GTTCACGGTC CCCAATTACG AGCTCAGCAT GGCCGTTCGA
ATTCTTCGGT TCGCATTCTT AATTGCTGGA GCCGTCCTGG GGTTTTACGG GATCGCCATT
CTGTTTGTCG TATATGTGGT GAGGCTGTCC ATGCTGAAAT CGTTCGGCGT GCCGTTCTTA
TCGCCCATCG CGCCGATCAG TGGTGCGGCC AGGGACGTGC TCGTGCGCGG TCCGATTTGG
GGAATGAACA AACGCCCGGC CTTCCTCAAC ACGCTGCGCA GTTGGCGGCA GAACCCCATG
ACCAGGCCGT GGTCTACGGC GACGCGCAAA GAGGCCGGAG AGGGGGATGG GAAATCATGA
 
Protein sequence
MDVGVGGALK RLLTVDDTVL NDDFSLSSDD DDPGADKYGD EPEMESVNFT TAENKMDTAK 
KPVSMRSFLR RAGREYEEAV DKAHAGQQDN IELDLDDMKR RLSRFFHLPQ NKDIVVREFS
VGVEGRSPWR GMVVYVDGLV DKNVINWAIL EPLMVWSHLA DDPKRTLSYV VDHLVPGHQT
QLIEKWSEVV FNVLAGSTVV FLDRCDAALV VESKGWEHRS VATPKMENVV RGSQDAFTEN
FRTNTGLVRM RLRSEHLVTE IHAVGNLAKT DVAIMYIHGM TNPKLVKEVR RRIADIDVDY
VLDAGMLEQF IEDRPSMMIP QVLVTERPDR VAAMLAEGYV AIFVGHSPVA IIVPVVLWSL
MHTSEDTNLR IIPGTFIRFI RWVALLTALL LPGLYIAVTN YHSEMLPTDL MLAIAGSREQ
VPFPVVVEVL LMEFAIELIR EAGIRIPSVI GPTIGIVGAL IIGQSAVQAG IVSPLLVIVV
ATTALASFTV PNYELSMAVR ILRFAFLIAG AVLGFYGIAI LFVVYVVRLS MLKSFGVPFL
SPIAPISGAA RDVLVRGPIW GMNKRPAFLN TLRSWRQNPM TRPWSTATRK EAGEGDGKS