Gene Aaci_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0417 
Symbol 
ID8423907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp485049 
End bp486215 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID645026546 
Productprotein of unknown function UPF0052 and CofD 
Protein accessionYP_003183865 
Protein GI258510431 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAGT GGTGGTTGCT TGCGTGGACC ATCGCCTGTT TCGGCATGGG CCTTTTGACG 
GGCGTCTTGC GGCTTTCGCA CTGGCCGCAC GCCGCCGAGA TCGGCGTCGC AATTGTGCTT
GCGGCTGTGG TGTTGCTCGC GTTCGGATGG TGGTCGGACA TTCGGCGCCA GCGGCGATTG
CAACGGTGGC GAGAGCGCAG GCTGAAGATT GTGTGCATCG GCGGCGGAAC GGGCTTGTCG
ACCATTCTTC GCGGTCTGAA GGAGTATGAC GTCGATCTCA CTGCGGTCGT GACGGTGGCG
GACGACGGGG GGAGTTCCGG GAGACTGCGA CATGACTTCG CCATGCCGCC GCCCGGGGAC
ATTCGCAACT GCTTGGTCGC GCTGGCGGAT ACGGAGCCGC TGCTCGAGCG CCTGTTGCAG
TTTCGCTTTC CCGCTGGAGA AGGGCTCGAG GGTCACAGCT TCGGGAACCT GTTTCTCGCG
GCGATGACGC ATATCATGGG CGATTTTGAG TCGGCGATTC GCGAGACGAG TCGCGTACTG
GCGGTTCGAG GCAAGGTGTT GCCGGCCGTG CGCGAGGACG TGCGCCTTCG CGCGTACCTC
GAGGACGGCC GCGTGGTTGA GGGTGAATCG CGCATTCCGG AGGCCGGCGG GCGCATCGAG
CGACTAGAGC TTGTTCCGGC ACACCTGGAA CCTCTGCCCG ACGTGATCGC GGCCATCGAG
TCCGCAGACG CGATCGTCGT GGGGCCGGGG AGCTTGTACA CGAGCGTGCT GCCGAACCTG
TTGGTTCCGG GTATCGCTGA AGCCATTGCG TCGAGCCGAG CCTGCAAAAT CTACATATGC
AACGTGATGA CTCAACGCGG GGAGACGGAC GACCTGTCGG CATCGAGCCA CGTGCGCGTG
ATTTATCGCC ACGTGGGTCG CCGGTTGTTC GATTATGTGC TGGTCAACGC GGCGCCGCTG
CCGGAAGAGG CCCTGCGGCG CTATCAGGAG CAACAGAGCT ACCCGGTTCG GGTGGACATG
GAGGAACTGC ACAAACTCGG GCTCAAGGTC ATCGCCCGCG ACTTCATTCA TTACGCGACC
TATGCCCGCC ACGACAGCCG GAAGGTAGCG GAGCAGATCG TGAGCCTGTT GGGCTACGAG
CGGGACACCA AGCACGCGAC GAGATAG
 
Protein sequence
MRQWWLLAWT IACFGMGLLT GVLRLSHWPH AAEIGVAIVL AAVVLLAFGW WSDIRRQRRL 
QRWRERRLKI VCIGGGTGLS TILRGLKEYD VDLTAVVTVA DDGGSSGRLR HDFAMPPPGD
IRNCLVALAD TEPLLERLLQ FRFPAGEGLE GHSFGNLFLA AMTHIMGDFE SAIRETSRVL
AVRGKVLPAV REDVRLRAYL EDGRVVEGES RIPEAGGRIE RLELVPAHLE PLPDVIAAIE
SADAIVVGPG SLYTSVLPNL LVPGIAEAIA SSRACKIYIC NVMTQRGETD DLSASSHVRV
IYRHVGRRLF DYVLVNAAPL PEEALRRYQE QQSYPVRVDM EELHKLGLKV IARDFIHYAT
YARHDSRKVA EQIVSLLGYE RDTKHATR