| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0400 |
|---|
| Symbol | |
|---|
| ID | 8423887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 456407 |
|---|
| End bp | 457975 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645026526 |
|---|
| Product | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_003183848 |
|---|
| Protein GI | 258510414 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0983248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAAC TCGCGCTCGT GAGCGTCTAC GACAAGGAAG GCATCGTGCC CTTTTGCGAA
GCGTTGCGCC AACTGGGATT TGACATCCTC TCGACCGGCG GCACCGCGAA GTTGCTGGAG
CAGTCGGGCG TTCCGGTCAC GCCCATCGAC GAGCACACCG GCTTTCCGGA AATTCTCGAC
GGCCGCGTGA AGACGCTCCA CCCCAGAGTG CACGGCGGCC TGCTTGCGCG CCGCGACGTG
CCCGAACATG TGCGGCAGAT CGAGGAGCAC GGCATCCGCG CCATCGATCT CGTCGTGGTC
AACCTGTACC CATTTGCGAA GACCATTCAG CGCGAGGGCG TGACGGACGA AGAGGCCATC
GAGATGATCG ACATCGGCGG CCCGGCGATG CTGCGCAGCG CGGCTAAAAA TCACGAATTC
GTGCTGCCCG TCATCGACCC CGCGGATTAC GACCGAGTCC TTCGCGCACT GCGCCAAGGG
GAGGTTCCGC GCGCGCTGCG CCGCGAGCTC GCCGCGAAGG TGTTTCGGGC GATTTCCCGC
TACGACGCGC TCATCGCCGA CTACCTGGCG GGCCATCTCG ACCCAAGCGC TGAGGTCGCG
GAAGATTGGC CGCAGGTGTT CCACGTGACG GGCGTCGCGA AGCAGGACCT GCGCTACGGC
GAGAATCCGC ACCAGCGCGC CCAGTTTTAC ATGGAGCCGA ACGCCACGAA GGCCACCATT
GCGCGCGCGG ATCAGCTTCA GGGCAAGGAA CTCTCCTATA ACAACATTCA GGACGCCGAC
AGCGCGCTTC AGATCCTGCG TGCGTTCGAC GACTTCGAGC AGCCCGTCGC GGTGGCGGTG
AAGCACATGA ATCCGTGCGG GATTGGCCGG GGCGAGACCC TCGAGCAGGC GTTTGAGCGG
GCGTACGAGG CGGATCCCGT CTCCATCTTC GGCGGCATTG TCGCGTTGAA CCGCGAGGTG
GACCGCAGGC TGGCGGAACG GCTCGCCGGC ATCTTCCTCG AGATCGTCAT CGCGCCGTCG
TTCACGGAGG AGGCGCGCGA GGTTCTTGCC AAGAAGAAGA ACCTGCGCCT ATTGACGGTC
GACATGTCGC AGCCCCTGTG GCGCCCGGGC GACGTCACGT TCCGGCGCGT GACGGGTGGC
TTCCTGGCGC AGACGGTCGA TCTCGCCAAG CCCATCGATG CGCGCAGTTG GCGCGTGGTG
ACGAAGCGGA CGCCCACGGA CGCCGAGTAC GAGGCGCTTC GCTTCGCGTG GCGAGCCGTG
CAATTCGTCA AGTCGAACGC CATCGTCGTG GCGGAGCGAG ACAAGACGCT CGGCATCGGC
GCAGGGCAGA TGAACCGCGT CGGCGCGGCC GAGATCGCCC TCAAGCAGGC GGGGGCGCGC
GCGAAGGGCG CGGTGTTGGC GTCGGACGCG TTCTTCCCGA TGCGAGACAC CGTCGACGCC
GCGGCGCGCG CAGGGATTGC GGCCATCGTC CAGCCGGGCG GCTCCATCCG CGACGAGGAC
AGCATCGCCG CGGCGGATGA AGCCGGGATC GCGATGGTGT TCACCGGCGA GCGGCATTTC
TTGCACTGA
|
|---|
| Protein sequence | MAKLALVSVY DKEGIVPFCE ALRQLGFDIL STGGTAKLLE QSGVPVTPID EHTGFPEILD
GRVKTLHPRV HGGLLARRDV PEHVRQIEEH GIRAIDLVVV NLYPFAKTIQ REGVTDEEAI
EMIDIGGPAM LRSAAKNHEF VLPVIDPADY DRVLRALRQG EVPRALRREL AAKVFRAISR
YDALIADYLA GHLDPSAEVA EDWPQVFHVT GVAKQDLRYG ENPHQRAQFY MEPNATKATI
ARADQLQGKE LSYNNIQDAD SALQILRAFD DFEQPVAVAV KHMNPCGIGR GETLEQAFER
AYEADPVSIF GGIVALNREV DRRLAERLAG IFLEIVIAPS FTEEAREVLA KKKNLRLLTV
DMSQPLWRPG DVTFRRVTGG FLAQTVDLAK PIDARSWRVV TKRTPTDAEY EALRFAWRAV
QFVKSNAIVV AERDKTLGIG AGQMNRVGAA EIALKQAGAR AKGAVLASDA FFPMRDTVDA
AARAGIAAIV QPGGSIRDED SIAAADEAGI AMVFTGERHF LH
|
|---|
| |