Gene Aaci_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0350 
Symbol 
ID8423837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp409625 
End bp410101 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID645026476 
ProductTOPRIM domain protein 
Protein accessionYP_003183798 
Protein GI258510364 
COG category[L] Replication, recombination and repair 
COG ID[COG1658] Small primase-like proteins (Toprim domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGACG TGATCCGACG AAGTCACCTT CGCCGCGCGG CCTGGGCCGC GCGCGATGAC 
GGAAGGAAGT TGAGCGACAT GCGGACGCAC GCGACTTCGC GAAAAGTCAT CATCGTCGAA
GGCAAGACGG ACAAGTCGAG AATTCTGAAG GTGCTGCGCG AAGAGGTGGA CGTGGTGTGC
ACGCAGGGCA CGCTGAGCTA CGAGCAGGTA GAAAACGACA TCGTCCCGCT GCAGCACGAC
GAGGTGTATA TCCTGGTGGA CGCAGATGCG GCTGGGAATC GGTTGCGCAA GCAGCTGAAG
CGAGAACTGC CGAACGCGAT CGACCTCTAC ACGCGCAAAT CGTATCGCGA GGTTGCCCGC
ACGCCGCTCG AACACCTTGC GAAGATTCTT GCGGACGCTC ACTTTGAGAT CGATGAGCAG
TGGCTGCAGG TGCGGCCGCC CCGACGGGAG CGGGTGCCGA AGACGGTTCA CGGATGA
 
Protein sequence
MMDVIRRSHL RRAAWAARDD GRKLSDMRTH ATSRKVIIVE GKTDKSRILK VLREEVDVVC 
TQGTLSYEQV ENDIVPLQHD EVYILVDADA AGNRLRKQLK RELPNAIDLY TRKSYREVAR
TPLEHLAKIL ADAHFEIDEQ WLQVRPPRRE RVPKTVHG