Gene Aaci_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0345 
Symbol 
ID8423832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp403460 
End bp404668 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID645026471 
Productpeptidase S11 D-alanyl-D-alanine carboxypeptidase 1 
Protein accessionYP_003183793 
Protein GI258510359 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTAGTT TGCGCGGTTT CGTCATTGCT ATCGTGATTG CCATCATCGT CATCGGCGTG 
CCGGTTCTCC AGTTGGTGCG CCCCATCCCG CAGGCGGCCT CCGATGTGGC CGCGCCACTG
CCGCGCGCCA TTCCGGGTGA GAAGCCCGTC ATCCATTGGC CTTCGCAGGG CGAGGCCGCG
CTGATGGCCG ACGGCGTGGG CAGCTTCGGA TCGTCCGGGC CTCAGGTTCC TGTGCCCATC
GCAAGCGTGA CCAAGGTCAT GACGGCGTAC CTTGTGCTTC AGAAGCACCC GCTGCAGCTG
GGGCAACAGG GGCCTTCCAT CACCATCACG CCGGATGACG TGAAGGTGTA TGAGAGAGAC
AAGGCCCTGG GACAATCCGT GGTGAAGGTG GCCGCAGGAG AACAAATCAC GGAATATCAG
GCGCTCGAGG GGCTGCTTTT GCCTTCCGGC AACAACATGG GCACGCTCTT GGCGAAGTGG
TGCGATGGCT CCGTGCAGGC GTTCGTCCAG GAGATGAACG CGACCGCGAA AAGGCTTGGC
ATGACCGAGA CGCACTACGC GGATCCCACG GGATACTCGC CCGCGAGCCA GAGCGACGCG
GTGGATCAAA TGAAGCTGTT TGCGCTGGCG ATGCAGAACC CGGTGTTCCG ACAGATTGTG
GGTGAGGCGC AAGCAGAGCT CCCTGTCGCG GGGCTTGTGT ACAATGTCGA TTCGGTGGTG
GGGCATGGAA CCATCATCGG AGGCAAGACG GGATCGACGC TCGAGGCGGG CGGCTGTTTT
GTGTTTGCCG CGCGCAAGGT CATCGGCAAC CGCGAGGTGC TGATCATCGG CGCGGTGCTG
GGTCAGAAGG GCCCGCAGCC CCTTGCTGAG GCGTTGACCG CGGCCGTCGC GATGTCGCAG
GACGCCCAGA AGGCGCTGCG ATCCGTCCAA CTCGTCTCCG CCGGGCAGAC GGTGGGGACG
CTGTCTGCGC CCTGGGCCAA GCCCGTCTCG CTCGTCGCGA CGGAGCCGGT GCAGGTCATC
GGCTGGGGAG GACTCCCCGT GCAGCAGACG TATCGGGCGG ATGTGCTGGA TCCGAAGAAG
CCGATTGCGG CCGACCAAGT GGTGGGCCAA CTCCAAATTC AGGTGGGGGC GCAGACGGTG
CGCGTGCCGG TTGCGGCCGC ATCGTCCGTT CCGGCGCCCA CGCTCAGTTG GCGCATGAAG
CGACTCTGA
 
Protein sequence
MRSLRGFVIA IVIAIIVIGV PVLQLVRPIP QAASDVAAPL PRAIPGEKPV IHWPSQGEAA 
LMADGVGSFG SSGPQVPVPI ASVTKVMTAY LVLQKHPLQL GQQGPSITIT PDDVKVYERD
KALGQSVVKV AAGEQITEYQ ALEGLLLPSG NNMGTLLAKW CDGSVQAFVQ EMNATAKRLG
MTETHYADPT GYSPASQSDA VDQMKLFALA MQNPVFRQIV GEAQAELPVA GLVYNVDSVV
GHGTIIGGKT GSTLEAGGCF VFAARKVIGN REVLIIGAVL GQKGPQPLAE ALTAAVAMSQ
DAQKALRSVQ LVSAGQTVGT LSAPWAKPVS LVATEPVQVI GWGGLPVQQT YRADVLDPKK
PIAADQVVGQ LQIQVGAQTV RVPVAAASSV PAPTLSWRMK RL