Gene Aaci_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0340 
Symbol 
ID8423827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp395525 
End bp396511 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content60% 
IMG OID645026466 
Product3,4-dihydroxyphenylacetate 2,3-dioxygenase 
Protein accessionYP_003183788 
Protein GI258510354 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID[TIGR02295] 3,4-dihydroxyphenylacetate 2,3-dioxygenase
[TIGR03211] catechol 2,3 dioxygenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGTATT CAATTGTCCG CGCGGGCCAT GCGGAACTCT TGGTGCGCGA TCTCGCCCTT 
TCGCGCAGAT TTTACGAAGA CATTCTCGGG TTTGTCGTCA CGGAGGAGTC CGAAGGGCGG 
TTGTTTCTTC GCGGGGTGGA GGAGCGCCAC CATCACAGTC TCGTGTTGAC GGAGTCAGAC 
GTGCCGATGC TCGGCCACCT GGCGTTCCGG GTGGCGGAGG ACGATGACCT CGATGCCATG 
GCGTCCTATT TTCAGACGCT GGGATGTCAC GTGCATTTCA TCGAGGATGG CGAAGAGCCC 
GGCCAGGGGC GAGCGCTGCG CGTGCAAGAT CCGTTTGGCT TCCCGCTCGA GTTCTACGCC 
GAAATGTCGC CCGCCGAGTG TCTGCTCCAG AAATATCATC TGCACAAGGG TGCCGGCGTG 
CGCAGACTGG ACCATTTCAA CTGCTTCGTC TCCGATCTGG CAAGCTGCGA GGCCATGTGG 
CGCGAGGGAT TGGGATTTCG CGTGACGGAG TACGTGGAGA CGGATGAAGA ACCTCGTGTG 
AAGAAGGCCG TCTGGCTTCA ACGCAAGGGT AACGTGCATG ATATCGCCCT CATGGAAGGC 
AGGGGACCTC GACTTCACCA CATCGGCTTT TGGATGGACG ACATCGGGAG CATTATACGC 
ACCTGTGACA TCTTGGGCGG AGCGGAGATG CACGAGCACA TTGAACGGGG GCCCGGGCGG 
CACGGTATAT CGAACGCGTT TTTCCTCTAT CTGCGCGATC CCGACGGTCA TCGCATTGAA 
CTGTACACAT CGGACTATTT GACTGTTGAC CCCGATCATC GACCCATCCG CTGGAGTGCG 
ACGGATCCCA GGCGGCAGAC GCTCTGGGGG CATCAGACGC CCGAGAGTTG GTGGCGGGAC 
GGGACGGTGG TCATGGATTG GGAACGCAAC GTTCCCGTCG AACTGTGCGG GACGACGGAC 
GCGCGTGCGG CTGGGTATAT CAAATGA
 
Protein sequence
MPYSIVRAGH AELLVRDLAL SRRFYEDILG FVVTEESEGR LFLRGVEERH HHSLVLTESD 
VPMLGHLAFR VAEDDDLDAM ASYFQTLGCH VHFIEDGEEP GQGRALRVQD PFGFPLEFYA 
EMSPAECLLQ KYHLHKGAGV RRLDHFNCFV SDLASCEAMW REGLGFRVTE YVETDEEPRV 
KKAVWLQRKG NVHDIALMEG RGPRLHHIGF WMDDIGSIIR TCDILGGAEM HEHIERGPGR 
HGISNAFFLY LRDPDGHRIE LYTSDYLTVD PDHRPIRWSA TDPRRQTLWG HQTPESWWRD 
GTVVMDWERN VPVELCGTTD ARAAGYIK