| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0330 |
|---|
| Symbol | |
|---|
| ID | 8423817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 383041 |
|---|
| End bp | 385419 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645026456 |
|---|
| Product | Peptidoglycan-binding domain 1 protein |
|---|
| Protein accession | YP_003183778 |
|---|
| Protein GI | 258510344 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4193] Beta- N-acetylglucosaminidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGACGC ATCGCCTGCT CGCGGTCATG GCGCTGCCAG CCACGGTGCT TTGGACGACG
CCGGCGTCTG CGCTGGCGCA GACCTCGAGC TCGCCGAGCG CTTCGGCGTC GTCGCTCAAC
GTGCCCGTGG CGGCTCTCAC ACTTGCGGGC GTTCAATCGT ATCCCATGTT GAGCTACGGC
TCCACGGGCG CCTATGTGGC CATTTTGCAG AATGCGCTGA ATGCACTGGG CTATGACGTG
GGACAAGCCA CCGGCGTCTT CGACGCCACC ACAGAGGCGC AGGTCAAGGC GTTTCAACAG
GCCGAAGGGC TTGGCGTCGA CGGGATTGTC GGGCCGATGA CATGGGGAGC CTTGGCCAAG
GCCGTCGCGG ATTATCGCCA GGTGATGACC GTGCTCACGC GTCCAAGCTC CCTCGTTCAG
CACGTCGAAT GGAAACGGAT TGTCTGGAAC GGGCAGCTCA TCTCGAAGCC CGTCGGCTTC
ACGTATCAGG GGACCGCCTA CATGCCCATT TGGTACGTGA TGGAGGCGCT TCGAAAGGCC
GGGATCGCGA GCACATGGTC GGGTGGCGTC TGGACACTCA CGCCGCCTGG GGGGCAGGCC
GTCGATTACG GCAAGATTTC GTACGGCCCC GGCAGCGCCG CCATCGCCAT CGGCCAGACG
GTCGTCGCGA ATGTGCCAGC GGTGGTGTAT CCAGACCCGG CGTCGGGCAA GCTGACGACG
TTCATGCCCG TCTGGTACGT GATGAACGCG CTTCAGCGGC TTGGGATCGC GTCGACATGG
CAGGGCACCG AGTGGGATAT GAAGCCGGGT CCCGTGGTGA TTGAGACGGG CGATCCGTCC
TCGAATTCCA CCGGATCCAG CAACGGCACG GGCAACAGCA CCGGCAACGC CACCGGCGCG
CTGCCAGGCG GCAACACCGT GGCGAACGTG ACGAATGCCA CCGGGTCGAC CAACGCCACG
GGCAACGGCA CGAGCAACGG AACCGGAAAC GCCACGAGCC TCGGCAATTC CACGGGGAAC
GCCGTCGGAA ACAGCACGTC GAATTCGACG GGCAACGCCA CGTCGAATGG CACGGGGAAC
TCGACCGGGA ATTCCACGGG CAACTCGACG GGCGGATCGA GCGGGCTGTC GTTCACCAAT
GTGGATCTCC GCTATCCTGC GCCGTCCAAC ATCAACGCGC AGAGCATCAA TCAGTTCTTG
CTGCAGAACA GTTCACCGCT GAACGGGCTC GGCAATTCAT TCATGGACGC GCAGAACCTG
TACAGCGTCG ACGCCAACTA TCTGGTCTCC CACGCAATCC TCGAGAGCGC ATGGGGCCAA
AGCCAGATTG CACTGCAGAA GAACAATCTG TTTGGCTATG GCGCGTACGA CTCGAATCCG
GGGCAGGACG CGGGCGTGTT CCCGAGCGAC GACTACGCCA TTCGCTTCGA GGCGTGGACG
GTGCGGACGA ACTATCTCAC GCCCGGCGCG AGCCTGTACG TCTCTCCGAC GTTGAGCGGC
ATGAACGTCA ACTACGCGAC GGCCAAGACG TGGGCGAGCG GCATCGCGGC CCTCATGACG
CAGTTCGCGA CATCCGTCGG ATCGAGCGTG AGCGCGTATG TGCAGTACGC GCCGTCCAAC
AACCCGCCGG CCCCGAAGTC GACAGCCGAG CCGGTGTATT ACGTGAACGG GGCGCAGGGC
GTCACGCAGC AGGATCCGTA TTACCCTAAC AACGGCGTCC CGTACTATCC GAGCATCGCC
CAGGGCGAGA ATCAGCAGTT CTTCGGCCAG CTCAGCGTCG GCAGCTTTGG ACAACCCGTG
GTGGAAATCC AGCGGTTCTT AAACCAAACC ATCAACGCGG GGCTCACGGT CGACGGCCAG
TTTGGCGCGC TGACGCAAGC GGCGGTGGAA AAGTTCCAGT CGCAGGTCAT GCACATGTCC
AACCCGAACG GCGTCTGGAC GTTCAGCATG TGGGTGCAGT ACATCCAGCC CTCGCAGTCG
AATGCGAATC TGATCCCCGC GGGCACGACG GTGAAGATCG ATCAGATTGC CGAAGGCATG
GCGGGGCCGT ACGTGGTCCC CTGGTACCAC GTCGTCGGCT ACGGCTGGGT GGACTCGCAG
TATATCAAGT TGACCAACGT GTACCGGGTC ATTGTCCAGA ACCCGGCGGG GACCGCGACC
ACCATTCCGG TCTATCAGGT GGGGGATCTG TCGAAGGTGT TGCTGAACCT GCACAGCGGC
GACTGGGTGG TCGCCAATTC GCCGCAGCCC TCGGGCGGCG TGTACACCAT CCAAATCGCT
GCGCAGGATC CCGTGGTCTC CAACGGATAC GCGGCCGACA CTCTGCTGAC CGGCGTGATT
CCCGCCAACG GCACCGTCAG CCTGGTGCCC CAAAGCTGA
|
|---|
| Protein sequence | MKTHRLLAVM ALPATVLWTT PASALAQTSS SPSASASSLN VPVAALTLAG VQSYPMLSYG
STGAYVAILQ NALNALGYDV GQATGVFDAT TEAQVKAFQQ AEGLGVDGIV GPMTWGALAK
AVADYRQVMT VLTRPSSLVQ HVEWKRIVWN GQLISKPVGF TYQGTAYMPI WYVMEALRKA
GIASTWSGGV WTLTPPGGQA VDYGKISYGP GSAAIAIGQT VVANVPAVVY PDPASGKLTT
FMPVWYVMNA LQRLGIASTW QGTEWDMKPG PVVIETGDPS SNSTGSSNGT GNSTGNATGA
LPGGNTVANV TNATGSTNAT GNGTSNGTGN ATSLGNSTGN AVGNSTSNST GNATSNGTGN
STGNSTGNST GGSSGLSFTN VDLRYPAPSN INAQSINQFL LQNSSPLNGL GNSFMDAQNL
YSVDANYLVS HAILESAWGQ SQIALQKNNL FGYGAYDSNP GQDAGVFPSD DYAIRFEAWT
VRTNYLTPGA SLYVSPTLSG MNVNYATAKT WASGIAALMT QFATSVGSSV SAYVQYAPSN
NPPAPKSTAE PVYYVNGAQG VTQQDPYYPN NGVPYYPSIA QGENQQFFGQ LSVGSFGQPV
VEIQRFLNQT INAGLTVDGQ FGALTQAAVE KFQSQVMHMS NPNGVWTFSM WVQYIQPSQS
NANLIPAGTT VKIDQIAEGM AGPYVVPWYH VVGYGWVDSQ YIKLTNVYRV IVQNPAGTAT
TIPVYQVGDL SKVLLNLHSG DWVVANSPQP SGGVYTIQIA AQDPVVSNGY AADTLLTGVI
PANGTVSLVP QS
|
|---|
| |