| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0315 |
|---|
| Symbol | |
|---|
| ID | 8423802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 363499 |
|---|
| End bp | 364821 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645026441 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_003183763 |
|---|
| Protein GI | 258510329 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACG TGAAGACGCT CCCGGGGGCG GCGAGCGCAC CCCACCTGCA GGACGCCGAA
ACGTATTTGG CGCGCGCGTA TCGGCCGTTC CTGCCCGCGA TGATCGCGAA GGCGGAGGGA
AGTCTGCTGT ACGATCTCGA CGGCAACCGA TACATCGACT TCGTGGGCGG CGTCGGCTGC
CTGAACGTCG GACACAGCCA CCCGAAGGTG GTGGCGGCCG TCGTGGAGCA GGCGAAGCGG
TTCACGCACA CGGACTACAC GATGTTCCCG TACACGTCGC TCGTCGAACT GGCGAAGCGC
CTCGCGCCGA AGACGCGCAT TCCGAACGCG AAGGGGCTTT TCTTCAACTC CGGCGCCGAG
GCCGTGGAGA ACGCGGTGAA GATCGCCAGA TGGGCGACGG GGAGGCCGGG CGTGATCGCG
TTCGACGGGG CCTTCCACGG GCGGACGTAC ATGGCCATGA GCCTCACCAG CAAGCTGCAC
CCGTACAAGG CGCACTACGG CCCGTACGCG CCGGAGGTGT ACCGGCTCCC GTACCCGAGC
GCGACGCACG GGCCGCGTCT CGATGAGTTC CGGCGGTTTC TCGACCGGGC CGCGGTGACG
TGGTTCGATC CGACCCAAAT CGCGTGCGTC ATCGCGGAGC CCATTCAGGG CGAGGGTGGG
TACATCGTGC CGGTGGAAGG CTTCTTCCCT CTCTTGCGAG AATTTTGCGA CAAACACGGG
ATCCTGCTCA TCGCGGACGA GATCCAGACC GGCTACGGGC GCACGGGGCG GTTTTTCGCC
ATGGAGCACG AGGGCGTGGT GCCGGATCTC ATGACGTGCG GCAAGTCAAT CGCTGCGGGG
CTGCCGCTTT CCGCCGTGTT CGGCCGGGCC GAGATCATGG ACGCGCCGGC CGAGAACACG
CTCGGCGGCA CGTATGTCGG CAACCCGGTA GCCGCAAGCG CGGGGCTCGC GGTGCTCGAC
GCGATGGAAG AGGAGGGGCT CGTGGCGCGG GCCGAGGAGG TCGGCGCGCG CATCCGCGCG
AAGCTCCTCG AACTTATGCG CGAGTGCCGG TGCATCGGCG ACGTGCGCGG GCGCGGCGCG
ATGCTCGCCG TGGAGTTCGT GCGCGATCGC GCCACGATGG CGCCGTACCC GGAGATGGTG
GCGAGGGTTC TGCGCCTCGC CATGGAGCGG GGGCTCCTGC TCATGAAGTG CGGCGTGTAC
AACAACGCGA TTCGCTTCCT GTGTCCGCTC AACATCCCAT GGGACGTGCT GGACGAAGGG
CTGGAGATCT TCGCGGCGGT GGTCCGCGAG GCGAAGGAGC GTGAGGCGCA TGCATCGGTT
TGA
|
|---|
| Protein sequence | MANVKTLPGA ASAPHLQDAE TYLARAYRPF LPAMIAKAEG SLLYDLDGNR YIDFVGGVGC
LNVGHSHPKV VAAVVEQAKR FTHTDYTMFP YTSLVELAKR LAPKTRIPNA KGLFFNSGAE
AVENAVKIAR WATGRPGVIA FDGAFHGRTY MAMSLTSKLH PYKAHYGPYA PEVYRLPYPS
ATHGPRLDEF RRFLDRAAVT WFDPTQIACV IAEPIQGEGG YIVPVEGFFP LLREFCDKHG
ILLIADEIQT GYGRTGRFFA MEHEGVVPDL MTCGKSIAAG LPLSAVFGRA EIMDAPAENT
LGGTYVGNPV AASAGLAVLD AMEEEGLVAR AEEVGARIRA KLLELMRECR CIGDVRGRGA
MLAVEFVRDR ATMAPYPEMV ARVLRLAMER GLLLMKCGVY NNAIRFLCPL NIPWDVLDEG
LEIFAAVVRE AKEREAHASV
|
|---|
| |