| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0310 |
|---|
| Symbol | |
|---|
| ID | 8423797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 355636 |
|---|
| End bp | 356679 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645026436 |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_003183758 |
|---|
| Protein GI | 258510324 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAGA TTGATGAAAT CTTGGCTTTG GCAAAAGAGA AAGAAGCTTC AGACGTCCAT
CTCTCAGCCG GGGCGCCTGT GACCTATCGC GTCCATGGCG ATCTCGAACC CATGGGTTCC
AAACTCATGC CGGTCGATCT CGAGGCCTTC GCGCGGCAGA TGCTTTCGGA GGAGCGCTGG
CAGCGGTTCA TGGAGGCGGG CGAGATCGAC TTTTCGTACA GCATTCCAGG CGTGGCTCGC
TTCCGGGTCA ATGCGTATCG GCAGCGGGGC TCCATCAGCA TCGCGGCGCG CCTCATCCCT
CAGCGGATTC CGACGATGGA GGAACTGAAC CTGCCGTCCG TGTTCAAAGC CCTGATGAAC
CGCCCGTATG GGCTCGTGCT CGTTACCGGG CCGACCGGAA GCGGCAAGAG CACGACGCTC
GCGGCGGTGC TCGATGCCAT CAACCAGACG CAGCGCCGGC ACATCATTAC GTTGGAAGAC
CCGATTGAAT ACCTGCACAC GCACAAGCTG TCGATCATCG ACCAGCGCGA GATCGGCCAG
GACACCTCGG GCTTCGCGCC CGCGCTGCGC GCGGCGCTCC GCCAGGATCC AGACATCCTG
CTCGTGGGCG AGATGCGCGA TCTCGAGACC ATCGCGACGG CCATCACGGC GTCGGAAACC
GGTCACCTGG TGTTCGCCAC GCTGCACACG TCGGACGCGG TGCAGACGGT GGAGCGCATC
ATCGACGTGT TTCCGCCGGA GCAGCAGGGC CAGATTCGCA TCCAGCTCGC AGGCGTGCTC
GCGGGCGTCG TCTCCCAGCG GCTGCACCGC ACGCGCGACG GGCGGGGGCG CGTGGCGTCG
TTCGAGGTGC TCGTGAACAC CCCCGCCGTG GCCAACCTCA TTCGAAGCGG CAAGACGCAC
CAGATCGGCG CCATGATGCA GACGGGCCGC CAGTTCGGCA TGATCACGAT GGAGATGAGC
ATTCGGGAAT TGGTGCAGCA GGGGAAGATC TCGCCTGCGG TACTCCGCCA GTGGCAGCCT
GCGCAGTTGT CGCAGCAGTC GTGA
|
|---|
| Protein sequence | MVQIDEILAL AKEKEASDVH LSAGAPVTYR VHGDLEPMGS KLMPVDLEAF ARQMLSEERW
QRFMEAGEID FSYSIPGVAR FRVNAYRQRG SISIAARLIP QRIPTMEELN LPSVFKALMN
RPYGLVLVTG PTGSGKSTTL AAVLDAINQT QRRHIITLED PIEYLHTHKL SIIDQREIGQ
DTSGFAPALR AALRQDPDIL LVGEMRDLET IATAITASET GHLVFATLHT SDAVQTVERI
IDVFPPEQQG QIRIQLAGVL AGVVSQRLHR TRDGRGRVAS FEVLVNTPAV ANLIRSGKTH
QIGAMMQTGR QFGMITMEMS IRELVQQGKI SPAVLRQWQP AQLSQQS
|
|---|
| |