Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0303 |
Symbol | |
ID | 8423790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 350124 |
End bp | 350651 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645026429 |
Product | type IV pilin |
Protein accession | YP_003183751 |
Protein GI | 258510317 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCAGA TGAAAATGAA GATTTCGAAT TTGAAACAAA AACTCCGGGA TCAGCGCGGC GTGACGCTGA TCGAAATGCT GGCGGTCGTT GTGATCTTGG CGATCCTGGC GGCGGTCGGC GTGCCGATTG TGCTGGCGCA GATCCAGAAG GCGCGCGTCA ACACCGATAA ATCGAACGAG CAGTTGATTG CGGACGCGCT GCAGCGGGCG GAGTATGATT ATCAGTCGAA CTCGACGAAT CAGGGGAGCC TGGGCATCAC GAACGGCGCG ATTATCAACG GCAGTGGCGC ACAGATCGGT GTGGTGTCGA ACGGGACGCT GTCGAACAAC GTGGCTGTTT ACAACTATCT GCTCGGTAAC GGGAGCGGAA ACGGGTATCT GACGAGCATT CCGACGCCGC AGTCCCAGAC GGGCAACTTC ACCATTGTCA CGACTCCGCC AGCAAATAAC TCCTCCACCC CGTCTGTCAC GTTTACGTAT CCGAACAGCA CCGGCGGCAT TCAAAGCTGG TATATCACCA TTCAGTAA
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Protein sequence | MGQMKMKISN LKQKLRDQRG VTLIEMLAVV VILAILAAVG VPIVLAQIQK ARVNTDKSNE QLIADALQRA EYDYQSNSTN QGSLGITNGA IINGSGAQIG VVSNGTLSNN VAVYNYLLGN GSGNGYLTSI PTPQSQTGNF TIVTTPPANN SSTPSVTFTY PNSTGGIQSW YITIQ
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