Gene Aaci_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0303 
Symbol 
ID8423790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp350124 
End bp350651 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content56% 
IMG OID645026429 
Producttype IV pilin 
Protein accessionYP_003183751 
Protein GI258510317 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAGA TGAAAATGAA GATTTCGAAT TTGAAACAAA AACTCCGGGA TCAGCGCGGC 
GTGACGCTGA TCGAAATGCT GGCGGTCGTT GTGATCTTGG CGATCCTGGC GGCGGTCGGC
GTGCCGATTG TGCTGGCGCA GATCCAGAAG GCGCGCGTCA ACACCGATAA ATCGAACGAG
CAGTTGATTG CGGACGCGCT GCAGCGGGCG GAGTATGATT ATCAGTCGAA CTCGACGAAT
CAGGGGAGCC TGGGCATCAC GAACGGCGCG ATTATCAACG GCAGTGGCGC ACAGATCGGT
GTGGTGTCGA ACGGGACGCT GTCGAACAAC GTGGCTGTTT ACAACTATCT GCTCGGTAAC
GGGAGCGGAA ACGGGTATCT GACGAGCATT CCGACGCCGC AGTCCCAGAC GGGCAACTTC
ACCATTGTCA CGACTCCGCC AGCAAATAAC TCCTCCACCC CGTCTGTCAC GTTTACGTAT
CCGAACAGCA CCGGCGGCAT TCAAAGCTGG TATATCACCA TTCAGTAA
 
Protein sequence
MGQMKMKISN LKQKLRDQRG VTLIEMLAVV VILAILAAVG VPIVLAQIQK ARVNTDKSNE 
QLIADALQRA EYDYQSNSTN QGSLGITNGA IINGSGAQIG VVSNGTLSNN VAVYNYLLGN
GSGNGYLTSI PTPQSQTGNF TIVTTPPANN SSTPSVTFTY PNSTGGIQSW YITIQ