Gene Aaci_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0297 
Symbol 
ID8423784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp343492 
End bp344112 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content62% 
IMG OID645026423 
ProductTPR repeat-containing protein 
Protein accessionYP_003183745 
Protein GI258510311 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.330144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCA AGCTTGTTGT ATCTGCTGGG TGTGCCGCAC TGATGGCGGG CCTGGTGGCA 
GGGTGCGGCA CAGCCAACAA TACGACAAAT CCGGCGAACA CGGCCGTCAA AAACCCCGCG 
GCGAAGAGCA ATACCACGGT CGTCCAGCAG GGGCACAACA ACCTCGTGGT GGCGCCGACA 
AGCGAGGTCG GAAGCGCCAA CCTGAAGCGG CTCACGGCCA TCGCGGACAA GCAGCCGTCC 
AACTTCGAGG CGCAGCTCAA CGCCGCGGAC AGCGCGTCCG CGAACGGCAA CACGGCGCTC 
GCCATCCAGT ACTTCAAGCG CGCCGTGCAG GCGAATCCCA AGTCCGGCCT GGCACTGACC 
GCGCTCGGCA ACATGTACCG CGAGCGCGAG AATCAGCCGA AGGAAGCCAT TCCGTACTAC 
CAGAAGTCGA TTCAGGTGGA TCCTTCGTAC GGCTGGGCCT ACTGGCAGCT GGCGCAGGCA 
TATCTCACGT TGAAGGAGAC GAGCCTCGCG AAGCAGACGC TCGAACAGGG CCTGAAGAAC 
GTCAGCAAGA AGGACACGGC CTATGCGGAT ATCCAGTCGG CGCTCGCGCA GTTGAACGGT 
TCGCAGAAGG CGCCCAAGTG A
 
Protein sequence
MNRKLVVSAG CAALMAGLVA GCGTANNTTN PANTAVKNPA AKSNTTVVQQ GHNNLVVAPT 
SEVGSANLKR LTAIADKQPS NFEAQLNAAD SASANGNTAL AIQYFKRAVQ ANPKSGLALT 
ALGNMYRERE NQPKEAIPYY QKSIQVDPSY GWAYWQLAQA YLTLKETSLA KQTLEQGLKN 
VSKKDTAYAD IQSALAQLNG SQKAPK