Gene Aaci_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0287 
Symbol 
ID8423774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp332880 
End bp333635 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID645026413 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003183735 
Protein GI258510301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.777586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCGT CCCGGCGCCT GTGCCGATAT CTCACCGCGT ACCTGACGGG CGAACTCGAC 
GAGCCCACGC TGGAGGCGTT CGAGCGCCAC GTGGCCCACT GCAGCGCGTG CCAGAGGGCA 
CTCGCCGAGG TCATGCCTTC CTGGCAGATG CTCTTGGAGG CCGAACCGGG CGAGGTGGAT 
CGGGCGTATG CCGAGTCGTG GAAGAAGGAC ATCCTTGCGC GCGTGCTCGG ACCACGGCCG 
CGGCTCCAGC CTGGGGGACG CCGCCTATGG CGCATGCGGC CGGAGCGCCT GTACCGGATC 
TGGGCTTATG CGGCGTCCGC TGCCGCCGTC GCGGCCTCGC TCGCTCTCGC GGTGGTCTGG 
AAGTCGGCGT CCTCTCTGCA GGGCCCGCCC GCGGACGCCA TCGCCACCGC GGCGAGCACG 
CCCATCGCCG ACGTCGATAT GACGCCCGTC GGCGACGAGG CCCATGGCAG CCTGTACGTC 
TTCCGGCAGG GGCAATCGCA GCGGCTCGTC CTCGTGGTCG AGGGTCTGAA GCCGGTGTCG 
GCGCCCGGCG CCTATAGCGT GTGGTACGTG CACGGCAGCG TGCATGAGCT GGCGGCCACG 
CTCCGGGTGG ATCCTCGCGG CGTCGGGATC GCCATGCTCC CGAGCCCGCC GCGCGAGGCG 
GAGATGGTCG GCATCACAAG GGAGCCTGAC GCGAAGGATG TGCGGCCCAA GGGGACGCGC 
GTGCTCATCG CCAAGTTGCC TCGAGGGGCG CTGTGA
 
Protein sequence
MSPSRRLCRY LTAYLTGELD EPTLEAFERH VAHCSACQRA LAEVMPSWQM LLEAEPGEVD 
RAYAESWKKD ILARVLGPRP RLQPGGRRLW RMRPERLYRI WAYAASAAAV AASLALAVVW 
KSASSLQGPP ADAIATAAST PIADVDMTPV GDEAHGSLYV FRQGQSQRLV LVVEGLKPVS 
APGAYSVWYV HGSVHELAAT LRVDPRGVGI AMLPSPPREA EMVGITREPD AKDVRPKGTR 
VLIAKLPRGA L