Gene Aaci_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0275 
Symbol 
ID8423762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp313178 
End bp313951 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content45% 
IMG OID645026404 
ProductABC-2 type transporter 
Protein accessionYP_003183726 
Protein GI258510292 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCGGA TGCGCGAGAT CATTGAATAC CGACCCATGC TTACAAGTCT TGTACGGTCG 
GAGCTTCGTG CGCGGTATAA GGGGTCAGTC TTAGGTTTTC TATGGACTTT CGTGAATCCG
CTCTTGCAAC TCGCGGTGTA CAGCCTCGTC TTCAAAGTGA TCTTGCGCTC TAATATTAGA
GACTATCCTG TATTTCTTTT TATCGGGCTG CTGGCATGGA ACATGTTCAC AGGAGCACTG
CAGAGTTCTT GCGGTGTGAT TGTCAATAAG GCATCCTTAG TCAAGAAAAT CTACTTTCCT
AGAGAAATTC TACCTGCTTC TATGGCCGGC ACAGCACTTG TCAATTATGT TCTGTCGCTT
GCTATTCTCA TTCCTATCTT GCTGATTACC GGTTTCTGGC CGACTTGGAG TTGGTTATTC
GCACCTGTTG CAATCGTGGC TATTTTTTTC ATGGCATTGG GACTCTCTCT AATATTCTCT
GCTATCAATG TATACATGAG GGATACCGAA CACATCTTGA ACATCGTGCT GATGCTTTGG
TTTTACGGAA CACCTGTCGT ATATTCGATC AACTCTGTTC CCCACTTCCT TTCAGCTTTG
TTTAAAGTAG ATCCGATAGC GGCAGCGATC CTTGTCTTAC AGGAGATCTT TTATTACCGC
GAAATCCCTC ATTGGAAAAT GTTGATATAT TGTGTTGTTA GCGGTGTCTG CATTCTTTGG
ATCGGATGGG CTATTTTCTA TAAGCTCAGT CGCCGGTTTG CGGAGGAGGT GTGA
 
Protein sequence
MQRMREIIEY RPMLTSLVRS ELRARYKGSV LGFLWTFVNP LLQLAVYSLV FKVILRSNIR 
DYPVFLFIGL LAWNMFTGAL QSSCGVIVNK ASLVKKIYFP REILPASMAG TALVNYVLSL
AILIPILLIT GFWPTWSWLF APVAIVAIFF MALGLSLIFS AINVYMRDTE HILNIVLMLW
FYGTPVVYSI NSVPHFLSAL FKVDPIAAAI LVLQEIFYYR EIPHWKMLIY CVVSGVCILW
IGWAIFYKLS RRFAEEV