Gene Aaci_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0260 
Symbol 
ID8423729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp286125 
End bp286907 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID645026371 
ProductABC transporter related 
Protein accessionYP_003183711 
Protein GI258510277 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.469491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAACGG AGGTCAAGAC ACAGCCGGTC CTCGAGGTGC GCAGCCTTCG CAAGCGATTT 
GGCGCCGTTC AGGCGTTGGA CGGTGTTTCG TTTTCCGTGC ATGCAGGCGA AATCGTGGCG
CTCGTCGGGG ACAACGGCGC CGGTAAGTCG ACCACCATCA AGATGATCGC GGGTGTCGAG
CAGCCGGACG AAGGAGAGAT CTTGTTCGAG GGCCAGCCGG TCCGCCTGAC GAGTCCAGCC
GTGGCAGAAA AGTACGGCAT TCAGACGGTC TACCAGGACC TCGCGCTCTG TGACAACCTG
GACATCGTCT CGAACCTGTT TCTCGGCCGG GAGCTGCGGC GCAGCGTGAT TCCCGGGCTG
GTGCGCGTGA TCGACCGGAA CGAGATGGAG CGGCGCGCCA TCCCTGTGCT GAACGAACTT
GGGATTCGCC TGCCCCCATT GCACACGCAG GTCGCATCGC TCTCCGGTGG TCAACGCCAG
ACGGTCGCTG TGGCGCGATC CGTCCTGTGG GGTTCGAAAC TCGTCATGCT CGATGAGCCG
ACCGCTGCGC TCGGCGTCGT GCAGCAGCGC GCGGTGCTTG AGCTCATCCA GAGGCTTGCA
GCGAGCGGCC GCGCGGTGCT CGTCATCTCG CACAACATGA GCGACGTGTT TAAAATTGCC
AACCGCATCG TGGTGCTGCG GTTGGGGCGA ACCGTGGCGA CGTTCGATCG GGAGCAAGTC
ACGCCCGAGC AGGTTGTGGC GGCCATCACG GGCGCATCGG CGCAAGAGGA GGTCACGTCC
TAA
 
Protein sequence
MATEVKTQPV LEVRSLRKRF GAVQALDGVS FSVHAGEIVA LVGDNGAGKS TTIKMIAGVE 
QPDEGEILFE GQPVRLTSPA VAEKYGIQTV YQDLALCDNL DIVSNLFLGR ELRRSVIPGL
VRVIDRNEME RRAIPVLNEL GIRLPPLHTQ VASLSGGQRQ TVAVARSVLW GSKLVMLDEP
TAALGVVQQR AVLELIQRLA ASGRAVLVIS HNMSDVFKIA NRIVVLRLGR TVATFDREQV
TPEQVVAAIT GASAQEEVTS