Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0260 |
Symbol | |
ID | 8423729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 286125 |
End bp | 286907 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645026371 |
Product | ABC transporter related |
Protein accession | YP_003183711 |
Protein GI | 258510277 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.469491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAACGG AGGTCAAGAC ACAGCCGGTC CTCGAGGTGC GCAGCCTTCG CAAGCGATTT GGCGCCGTTC AGGCGTTGGA CGGTGTTTCG TTTTCCGTGC ATGCAGGCGA AATCGTGGCG CTCGTCGGGG ACAACGGCGC CGGTAAGTCG ACCACCATCA AGATGATCGC GGGTGTCGAG CAGCCGGACG AAGGAGAGAT CTTGTTCGAG GGCCAGCCGG TCCGCCTGAC GAGTCCAGCC GTGGCAGAAA AGTACGGCAT TCAGACGGTC TACCAGGACC TCGCGCTCTG TGACAACCTG GACATCGTCT CGAACCTGTT TCTCGGCCGG GAGCTGCGGC GCAGCGTGAT TCCCGGGCTG GTGCGCGTGA TCGACCGGAA CGAGATGGAG CGGCGCGCCA TCCCTGTGCT GAACGAACTT GGGATTCGCC TGCCCCCATT GCACACGCAG GTCGCATCGC TCTCCGGTGG TCAACGCCAG ACGGTCGCTG TGGCGCGATC CGTCCTGTGG GGTTCGAAAC TCGTCATGCT CGATGAGCCG ACCGCTGCGC TCGGCGTCGT GCAGCAGCGC GCGGTGCTTG AGCTCATCCA GAGGCTTGCA GCGAGCGGCC GCGCGGTGCT CGTCATCTCG CACAACATGA GCGACGTGTT TAAAATTGCC AACCGCATCG TGGTGCTGCG GTTGGGGCGA ACCGTGGCGA CGTTCGATCG GGAGCAAGTC ACGCCCGAGC AGGTTGTGGC GGCCATCACG GGCGCATCGG CGCAAGAGGA GGTCACGTCC TAA
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Protein sequence | MATEVKTQPV LEVRSLRKRF GAVQALDGVS FSVHAGEIVA LVGDNGAGKS TTIKMIAGVE QPDEGEILFE GQPVRLTSPA VAEKYGIQTV YQDLALCDNL DIVSNLFLGR ELRRSVIPGL VRVIDRNEME RRAIPVLNEL GIRLPPLHTQ VASLSGGQRQ TVAVARSVLW GSKLVMLDEP TAALGVVQQR AVLELIQRLA ASGRAVLVIS HNMSDVFKIA NRIVVLRLGR TVATFDREQV TPEQVVAAIT GASAQEEVTS
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