| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0258 |
|---|
| Symbol | |
|---|
| ID | 8423727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 283432 |
|---|
| End bp | 284604 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645026369 |
|---|
| Product | glycoside hydrolase family 18 |
|---|
| Protein accession | YP_003183709 |
|---|
| Protein GI | 258510275 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3858] Predicted glycosyl hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.210601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATTC ATGTCGTCGA GCCTGGAGAC ACGCTGTGGG AGCTGGGCAA GCTGTACCAC
GTCTCGGCTG CCGATATCGC GGCCGCAAAC GGCATTCGAA ATCCGGAGCA GTTGGTCGTC
GGGCAGGCGC TCGTCATTCC GACGCGTCAG GGCGAGGTGA CCGGGGCGGA GCGCCGCACC
ATCGAGGTCA ATGCGTACTT TGTTCAGTTC ACCGATCCCG CGCCGCATCA GCTGGACGTG
CTCGCCCCTG TGCTGACGTA TGTGTCGCCC TTTTCATACC AGGCGGAAAC GGACGGATCC
ATCCGGGCGC GATCGGACGA AACGGCTTTG GTGGACGCGG CCCTGAATCA GAACGTGATG
CCGATGCTCG TGCTGACCAA CTGGCACGGA GACATGTTCA ACTCGGACGT GGCGCACGCT
ATTTTCACGT CGCCGTCCGC GCAGGAGAAG ATCCTCACGA ACGTGCTCCG CGTGATGAAC
GACAAGGGCT ATCGAGCGCT CAACCTCGAT TTCGAATACG TGTACGCGCA AGATCGCGAC
CTGTACAACG CCTTCGTCGA GCGCTGCGCC GAGCGCGTGC GCAAAGAAGG ATTCCTCCTT
TCCAGCGCGC TTGCGCCGAA GCTGTACGAG GACCAGCCGG GGCTCCTATA CGAGGCCCAC
GACTATCGCT GGCATGGGGA ACTTTGCGAT TTCGTCGTCC TCATGACCTA CGAGTGGGGC
TGGATAGGCG GCCCGCCGAT GCCGGTCTCG CCTGTCGATC AGATGCGAAA GGTCCTGAAC
TACGCCGTCA CGGCCATCCC GCGCGAGAAG ATCATGCTCG GTGTGTCGGT GTACGGGTAC
GACTGGACGC TTCCGTATCG CCCCGGCACG CGCGCCGCGA CCCTCACGCC GGTTCAGGCG
GTGAATCTCG CGTATCAGCA GCACGTGCCC ATCCAATACG ATCTTCGGGC CGAAGCGCCG
TATTTCACCT ATTCGGATGC AGAAGGGCGA CACCACATCG TGTGGTTCGA GGACCCGCGC
AGCTTTCAGG CCAAGCAGGA CTTGGTTGTC GAGTACAACT TGCGGGGCAT GAGCTTCTGG
TCCTATCCCA CGAACTTCCC TCAGGTGCCC ATCCTCGTCA ACAATCAGTT CAACACGAAG
AAGTGGACGC GGGAGCAGAC TCCTGTGGGC TGA
|
|---|
| Protein sequence | MLIHVVEPGD TLWELGKLYH VSAADIAAAN GIRNPEQLVV GQALVIPTRQ GEVTGAERRT
IEVNAYFVQF TDPAPHQLDV LAPVLTYVSP FSYQAETDGS IRARSDETAL VDAALNQNVM
PMLVLTNWHG DMFNSDVAHA IFTSPSAQEK ILTNVLRVMN DKGYRALNLD FEYVYAQDRD
LYNAFVERCA ERVRKEGFLL SSALAPKLYE DQPGLLYEAH DYRWHGELCD FVVLMTYEWG
WIGGPPMPVS PVDQMRKVLN YAVTAIPREK IMLGVSVYGY DWTLPYRPGT RAATLTPVQA
VNLAYQQHVP IQYDLRAEAP YFTYSDAEGR HHIVWFEDPR SFQAKQDLVV EYNLRGMSFW
SYPTNFPQVP ILVNNQFNTK KWTREQTPVG
|
|---|
| |