Gene Aaci_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0255 
Symbol 
ID8423724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp280321 
End bp280920 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content64% 
IMG OID645026366 
Productpolysaccharide deacetylase 
Protein accessionYP_003183706 
Protein GI258510272 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCGCC AAACGCCCGA ACCCTCGTCG CCCCCGCGTC ACCTCGCCAT CACCTTCGAC 
GACGGCCCAG ACGGGGACAT GACGCCCAAG ATCCTGTCCA CGCTCCGGGA TTACGGCGTG 
CCCGCCACCT TTTTCTGCAT CGGCCAGCAA GTCGAACGAT TTCCCGATGT CCTCAAATCC 
ATCCACCAGG CCGGGCACGA GATCGGCAAC CACACCATGA CCCATCCCTA CCTCACGAAA 
TTGACGGACG CCGAGATCGA ACGGGAATTG CGCGAATGCC AAGCGGCCAT TGAGAAGGTC 
GTGCAGGTGC CCATCCGCTA CTTTCGCCCG CCGTACGGAG ACATCGACGA TCGCGTCCGC 
CGCATCGCGG CCTCCCTTCA CTACGAAGTC GTCCTCTGGG ACGTCGACTC GCTCGATTGG 
TCTGGGATTC CCGGCCCAGC CGTCGCGGCC AACGTGCTGC CCAAGCTCAG GCCGGGCGCC 
ATCATCCTGA TGCACGCCGG GCCGTTTGCG AAGGGTACGC CGGAGGCGCT CCCGTACGTG 
CTCGAGGTGG CGGTGGCAAT GGGCTACGAT TTCGTCCCGC TCGCGAAGCT TCACCGGTGA
 
Protein sequence
MQRQTPEPSS PPRHLAITFD DGPDGDMTPK ILSTLRDYGV PATFFCIGQQ VERFPDVLKS 
IHQAGHEIGN HTMTHPYLTK LTDAEIEREL RECQAAIEKV VQVPIRYFRP PYGDIDDRVR 
RIAASLHYEV VLWDVDSLDW SGIPGPAVAA NVLPKLRPGA IILMHAGPFA KGTPEALPYV 
LEVAVAMGYD FVPLAKLHR