Gene Aaci_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0220 
Symbol 
ID8423689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp239785 
End bp241245 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID645026332 
ProductPTS system, mannitol-specific IIC subunit 
Protein accessionYP_003183672 
Protein GI258510238 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component 
TIGRFAM ID[TIGR00851] PTS system, mannitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGACCC ATGTTGCGGC GCAACCCGTC GCGTCGAGTG GCCGGGCTCG GGCGGCGATG 
CAAAAGTTCG GTGGCTTTCT GGCGGGCATG GTCATGCCCA ATATCCCGGC GTTTATCGCG
TGGGGTCTGA TCACCGCATT CTTCATTCCC ACGGGGTGGA CCCCGAACGC GAAACTCGAC
CAACTGGTCT CCCCCATGGT CTCCTTTCTC ATTCCCGTTC TCATTGGCTT CACCGGTGGG
CGTCTCGTGC ACGGGATCCG CGGGGGCGTC GTCGGCGCCA TCGCCACGGC GGGCGTGGCC
ATCGGCGCGT CTCAGCCGAT GTTCATTGGC GCGATGATCA TGGGGCCGCT CGGCGGCTAC
CTGATCAAGC AGTTCGATCG CGCCGTCGAA GGGCGCATCC GCGCAGGATT CGAGATGTTG
GTGAACACGT TTTCCGCGGG CATTCTGGGC GGTGCACTCG CGATTCTCGG CTTTCTGGCC
GTGCAGCCGG TCATGGATCG CGTCTCCGCC TGGCTGGGCG CGGCGGCCGT GTGGGTGACC
AACGCGCATC TTCTGCCGCT CATCGCCATC TTTATCGAGC CAGGCAAGGT GCTGTTTTTG
AACAACGCCA TCAACCACGG TATCCTTGAA CCCATTGGCG TCGAGCAGGC CAAGCAGACG
GGCAAATCTA TTTTCTTCCT GCTCGAAACC GATCCGGGGC CGGGTCTCGG GCTGCTCATG
GCCTACTGGG CGTTCGCGAA GGGCGCCATT CGGCAGTCGG CGCCTGGCGC GATTCTGATT
CAGTTCTTCG GCGGAATTCA CGAGGTGTAC TTCCCGTACG TGCTGATGCG GCCCGTCCTG
GTGCTCGCCG TGATCCTGGG CGGCATGGCG GCCGACACGA CCTTCATGCT GCTGCACGCG
GGACTTGTGG CGACCCCGTC GCCCGGCAGC ATCTTCGCCG AGATCGCCAT GACGCCGAAA
GGCGGCTACT TCCCGGTGCT GTCGGGCATC TTTGTCGGTG CGCTGGTCTC GTTCCTGGTG
GCTTCCTTCT TCATCCGCCT TTCGCGCGAT GAGATGGACG AGAGCACCTT GGCGTTTGCG
CAGGCCGTGG TGCAGGACAT GAAGTCTCAA TCCAAGTTTG CGCCGTCCGC GCAGGCCACG
GCTCAAGCGC CGGTGGAAGA AGCGACGCTC GCGCGCGTGC CGGAGGCCGT GTACTTCGCG
TGTGAGGCCG GTATGGGATC GAGCGCGATG GGCGCTTCAA TTCTCAAAAA GCGGCTGCAG
GAGGCGGGTT ACGACATCCC CGTCCATCAC GTGCCGGTGA ATCAACTGCC TTCCACGGCT
GAAGTGGTGT TCACGCAGGC CAGCTTCGAG ACCCGCGCGC GGCAGGTCGC GCCGAAGGCG
AAGATCTACT TGGTGCAAAA CTTCTTGAAC AAGGCGACCT ACGACCAGTT GATTGAGGAC
CTTGACCGTC TGAAGGGATG A
 
Protein sequence
MATHVAAQPV ASSGRARAAM QKFGGFLAGM VMPNIPAFIA WGLITAFFIP TGWTPNAKLD 
QLVSPMVSFL IPVLIGFTGG RLVHGIRGGV VGAIATAGVA IGASQPMFIG AMIMGPLGGY
LIKQFDRAVE GRIRAGFEML VNTFSAGILG GALAILGFLA VQPVMDRVSA WLGAAAVWVT
NAHLLPLIAI FIEPGKVLFL NNAINHGILE PIGVEQAKQT GKSIFFLLET DPGPGLGLLM
AYWAFAKGAI RQSAPGAILI QFFGGIHEVY FPYVLMRPVL VLAVILGGMA ADTTFMLLHA
GLVATPSPGS IFAEIAMTPK GGYFPVLSGI FVGALVSFLV ASFFIRLSRD EMDESTLAFA
QAVVQDMKSQ SKFAPSAQAT AQAPVEEATL ARVPEAVYFA CEAGMGSSAM GASILKKRLQ
EAGYDIPVHH VPVNQLPSTA EVVFTQASFE TRARQVAPKA KIYLVQNFLN KATYDQLIED
LDRLKG