Gene Aaci_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0213 
Symbol 
ID8423682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp232868 
End bp234064 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content63% 
IMG OID645026325 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003183665 
Protein GI258510231 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGTGG TGCAGGCGGT TCGCGAACAG GGGCGGATGA ACCGGGACGC CGTGTGGAGT 
ATCAGCGGTT CTCACTTTCT CAACGACTTG TCGACGACCG GGCTGGTGCC GGCGTTGACG
CAGCTGTACA AGCCGCTGTT TCACCTCAAC TACACGGAGA TCAGCCTGAT CGTGCTTGTG
TCCTATATCA CGTCGTCCGT GGCCCAGCCC TTGTTCGGCG CCTGGGCGGA TCGCCATCCG
AAGGCGTGGA TGCTTCCATT GGGACTCTTG TTATCCACGC TCGGGATCAC GCTGACGGGG
GTTGCGTCGA GCTACGGCGC GCTGCTGCTC ATGGTGGCCG TGAGCGGCCT GGGATCGGGG
GCGTTCCATC CCGAGGCCTC GCGCGTGGCA CACCTCGCGG CGGGGCGGGC GAAGGGCCTG
GCTCAGGCCA TCTTTCAGGT CGGAGGAAAC GGCGGTCAGG CCATTGGTCC GCTCATCGTG
TCGCTGTTCA TTCTCTCGGC TGGCCTTCAT AGCATCCTGT GGATGTTTAT CGGTGTGGCG
CTGGGTTTGG TGTTCACGCT CCGGTTGTAT CCGTGGTACA AGGCGGCGCT TCGCGATTAC
GCGAAGGTGC GCAAGACCAT CGAGGGCGAG AATCGGATCG GCGCCGTCGC GCTGCTGGTG
GTCGTGATCG TGCTTCGCTC GTGGTGCCAA ATCGGCATCG CCCAGTTCAT GCCGTTCTAC
TACGCGCACA AATTCGGGAT GTCGTATCAG CTGTCCGATG CGCTCATGTT CGTGTTTCTG
GGGGCGGGCG CGCTGGGGAC GTTCATCGGC GGCGCCCTCG CGGATCGCAT GCCGAAGCAG
CGCATCCTTC TCCTGTCGAT GCTGTTGTCG ATCCCGTTCG GCTTTGGGTT GCCGTTCCTC
CACGGCGCGT GGGCTGCCGT CGCGCTGTTG CCGTTTGGGT TTTTCATCCT TTCGTCGTTT
GCGGTCACCG TCGTCTACAT GCAGATGCTC CTGCCGCGCA ATGTCTCCCT CGCGTCCGGG
CTCACCATCG GATTTGGTGT GGGCGCGGGC GGGATCGGCG CGACCTTCTT TGGCGTATTG
GCCGATCACG TCGGTCTCAC GAGCGTCCTC TACATCCTGA TGGTGGTTCC CATCGTCGGC
GCGATTCTTT CCGCCTTTCT TCCCGTCGAT TCGAAGGGCG GATTCGCTCG CGCTTGA
 
Protein sequence
MAVVQAVREQ GRMNRDAVWS ISGSHFLNDL STTGLVPALT QLYKPLFHLN YTEISLIVLV 
SYITSSVAQP LFGAWADRHP KAWMLPLGLL LSTLGITLTG VASSYGALLL MVAVSGLGSG
AFHPEASRVA HLAAGRAKGL AQAIFQVGGN GGQAIGPLIV SLFILSAGLH SILWMFIGVA
LGLVFTLRLY PWYKAALRDY AKVRKTIEGE NRIGAVALLV VVIVLRSWCQ IGIAQFMPFY
YAHKFGMSYQ LSDALMFVFL GAGALGTFIG GALADRMPKQ RILLLSMLLS IPFGFGLPFL
HGAWAAVALL PFGFFILSSF AVTVVYMQML LPRNVSLASG LTIGFGVGAG GIGATFFGVL
ADHVGLTSVL YILMVVPIVG AILSAFLPVD SKGGFARA