Gene Aaci_0208 details

Gene Information

• Locus tag: Aaci_0208
• ID: 8423674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
• Kingdom: Bacteria
• Replicon accession: NC_013205
• Strand: +
• Start bp: 223430
• End bp: 223906
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 645026317
• Product: transcription elongation factor GreA
• Protein accession: YP_003183660
• Protein GI: 258510226
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000182043
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGATA AAGAAGTGTT GCTCACGCCC GAGGGCCTGC GGAAGCTCGA GGAGGAGCTC 
GAGCTCCTGA AGAGCGTCAA GCGGCGCGAG GTTGCGGAGC GCATCAAGGT TGCCATCAGC 
TACGGAGATA TTAGTGAGAA TTCTGAGTAT GAAGATGCGA AGAACGAGCA GGCGTTCATC 
GAAGGCCGCA TCATGACCCT CGAGAAGCAG CTGCGCAACG CGCGGGTCAT CAACGAGGAC 
GAGGTCGACA CCAACGTCGT CAGCATCGGA TCGACCGTCA AGGTGTTGGA TCTGGATCTG 
GACGAGGAAG TGGAATACAC CATCGTCGGT TCCGCTGAGG CCAACCCCGC GGAGAACAAG 
ATCTCGAACG AGTCGCCCGT GGGCAAGGCG CTGCTTGGCA AGCAGATTGG CTCGATCGTC 
GAGGTGAACG TGCCCGCAGG CGTCATCAAG TTCAAAATCC TTGAGATCAA GCGGTAA 

 

Protein sequence

MADKEVLLTP EGLRKLEEEL ELLKSVKRRE VAERIKVAIS YGDISENSEY EDAKNEQAFI 
EGRIMTLEKQ LRNARVINED EVDTNVVSIG STVKVLDLDL DEEVEYTIVG SAEANPAENK 
ISNESPVGKA LLGKQIGSIV EVNVPAGVIK FKILEIKR