Gene Aaci_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0169 
Symbol 
ID8423635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp186628 
End bp187932 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content57% 
IMG OID645026278 
ProductIntegrase catalytic region 
Protein accessionYP_003183621 
Protein GI258510187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.287637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCAGG AAGAAGCTCG GCGTCTCACG GTCATTTCGA AATTGATTGA CGGCCATCTC 
TCGGTCGCTC AGGCTGCTGA ATATTTACAG CTTTCGATTC GTCAAGTTCT TCGTATCAAA 
AAACGCGTCC TCGAGGAGGG GGAAGCAGGG GTCATTCATA AAAACCGAGG ACGCCAACCT 
TCCCATACGT TACCCCAATC CCTGAAGCAC AAGATTGTCG CGCTGTATCA GTCGGACGAC 
TATCGCGGCT GTAACGATAC GCACTTCACA GAGCTTTTGG CAGTACGTGA AAACATCTAC 
GTCAGCACGT CCACCGTTCG GCGTATCCTC CGTGCAGCCG GTATTTCAGC CGCCCGCAAA 
CATCGTGCAC CACGATCCCA TCGCTCGCGT CGTAGAATGC CCCAAGCGGG CCTGCTATGG 
CAAATGGATG CCAGTACCTT CGACTGGTTA GAAGACCGCG GACCGCGTCT GACCTTGCAT 
GCTGCGATCG ACGACGCCAC GGGGCGAATC GTCGGTGCTG CATTTGCCCG CACGGAGTGT 
CTTGAGGGCT ATTGGTCCGT TCTTCACCAC GGCATCACGG CGTATGGCAT CCCCGTCGCC 
CTGTACGTGG ATCGCCATAC GATCTTCCGC TCGCCCAAGG CTGACAAACT CACGATCGAC 
GAAGAACTGG CTGGCGTCAA ACCTTCCACT CAACTTGGCA GGGCAGTGGC CGAACTCGGG 
ATTTCCTTGA CCTTTGCACG CTCCCCGCAG GCGAAAGGGC GAATTGAACG TCTTTGGGAG 
ACCCTTCAGG ACCGCCTAAC CCATGAACTA CGCCTGCACC GTATCTCAAC CCTTGAAGCG 
GCAAATGCCT TCCTTCCCGC GTTTGTTGAG CGGTTCAACG CACGTTTTGC TGTGGAGCCT 
GAGTCACCAG AACCGGCATA CCGACCACTG GCTCCCCACC ACAACCTCCA CCGTATTCTT 
TGCTACCGGG CTTGGCGTAA GGTTTCACCC GGTCAAACGA TTTCGTGGAA AGGACAAACG 
TACCGCATTG TTCCCGAACA GCACCGGGAG ACTCTGGCCC CTCGTTCCAC CGTGGAGGTT 
CGGGTGACTA CTAATGGAGA ATTGTGGATT GTGGCGGGGC AAGGTCGGTT GTATCGTCTC 
GAGCCTTGTT CGAAGTCTCC GGCTGTGAAA AGGCGGGAAG ATGCCACACC CACACCTTCC 
CGCCAACCCT ACAAGCCCCC TGCAGACCAT CCATGGCGTC GAATGACTCT CGGCCGCCCA 
AAACCGAAGC TTCCAACCCC GTCTGCAGAG GCAATTTCAC CGTAA
 
Protein sequence
MRQEEARRLT VISKLIDGHL SVAQAAEYLQ LSIRQVLRIK KRVLEEGEAG VIHKNRGRQP 
SHTLPQSLKH KIVALYQSDD YRGCNDTHFT ELLAVRENIY VSTSTVRRIL RAAGISAARK 
HRAPRSHRSR RRMPQAGLLW QMDASTFDWL EDRGPRLTLH AAIDDATGRI VGAAFARTEC 
LEGYWSVLHH GITAYGIPVA LYVDRHTIFR SPKADKLTID EELAGVKPST QLGRAVAELG 
ISLTFARSPQ AKGRIERLWE TLQDRLTHEL RLHRISTLEA ANAFLPAFVE RFNARFAVEP 
ESPEPAYRPL APHHNLHRIL CYRAWRKVSP GQTISWKGQT YRIVPEQHRE TLAPRSTVEV 
RVTTNGELWI VAGQGRLYRL EPCSKSPAVK RREDATPTPS RQPYKPPADH PWRRMTLGRP 
KPKLPTPSAE AISP