Gene Aaci_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0130 
Symbol 
ID8423596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp146148 
End bp146723 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content69% 
IMG OID645026240 
Productprimase/topoisomerase like protein 
Protein accessionYP_003183583 
Protein GI258510149 
COG category[L] Replication, recombination and repair 
COG ID[COG1658] Small primase-like proteins (Toprim domain) 
TIGRFAM ID[TIGR00334] ribonuclease M5 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.504524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATT CGCGCCCGAA GCTGCGCGAG GTCGTGGTGG TGGAGGGGCT GCACGACAAA 
CAGCGGGTGG ATGAGGCGGT CGACGCCGAG GTGCTCATTC TGGGCGGCGA TCGCGTCAGC 
CGCCGCACGG TGGATCTGCT CCGGCGCGCG GTCCAGGTAA GGGGCGCCAT TGTGCTCACG 
GATCCGGACG GCGCGGGAGA GCGCATCCGG CGCCGGTTGG ACCAGCTTGT GCCCGGCCTC 
CTGCACGCCC ACCTCCGCAA GGCGAGCGCC ACGTCGAGTC GCGGCGTCGG GATCGAACAC 
GCGAGTGCCG AGGACGTCCG CCGGGCGCTC ATCGAGGCGC GCGGACGCGA GACGCCCCGG 
GCTGAGCAGG GTTCCGGCGA GACTCCCGAA TTCACCTTGG ACGATCTCGC TCGCCATCGT 
CTCGTCCACC ATCCCGATGC GGCCAGTCGG CGCGAGAGGC TCGGCGAGTG GCTCGGTATC 
GGCTACGGGA ACGCCAAGGC GTTTTTGCAC AAGCTGAACG CGTACGGCGT CACGCGCGAA 
GCGTTTGAAG AGGCCGTCAG GAGGTTGGAT GGATGA
 
Protein sequence
MTDSRPKLRE VVVVEGLHDK QRVDEAVDAE VLILGGDRVS RRTVDLLRRA VQVRGAIVLT 
DPDGAGERIR RRLDQLVPGL LHAHLRKASA TSSRGVGIEH ASAEDVRRAL IEARGRETPR 
AEQGSGETPE FTLDDLARHR LVHHPDAASR RERLGEWLGI GYGNAKAFLH KLNAYGVTRE 
AFEEAVRRLD G