Gene Aaci_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0124 
Symbol 
ID8423590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp140519 
End bp141178 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID645026234 
ProductPSP1 domain protein 
Protein accessionYP_003183577 
Protein GI258510143 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00134499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACGA TAGTCGGCGT GCGCTTCAAA CCGGCCGGGA AGATTTATTA TTTCGATCCC 
GGCGATCTTC CGATAGAAAA GGGCGCGGAC GTGATCGTCG AGACCACGCG CGGGATTGAG 
TGCGGGCGCG TGGTGGTGGG GCCGAAACAG GTGGCGGAGG ACGACGTCGT CCTGCCTCTT 
AAAGAGGTCA TGCGGATCGC CACGGAGGCG GACCGGGCGG TGGTGGAGGA GAATCGCCGG 
CGCGCCAAGC AGGCGATGGG GGTGTTTCGC GAGAAGGTGG CGAAGCACGG CCTGGAGATG 
AAGCTCGTGG ACGCGGAGTA CACGTTCGAC CGGAACAAGC TCATCTTCTA CTTCACCGCC 
GACGGGCGCG TGGATTTTCG CGAACTGGTG AAAGATTTGG CCAGCGTGTT CCGCGTGCGG 
ATCGAGCTCC GGCAAATTGG CGTGCGGGAC GAGGCGAAGA TCCTCGGCGG AATTGGCCCG 
TGCGGGCGCC TGTTGTGTTG TTCCACCTGG ATGGGCGAGT TCGATCCCGT CTCCATCCGG 
ATGGCGAAGG ATCAGAGCCT GTCGCTCAAT CCGTCCAAAA TCTCGGGCCT GTGCGGCCGC 
CTGATGTGTT GCTTGAAGTT CGAGAACGAC GCATACCACG ACCAGGACGC GATGGCGTAA
 
Protein sequence
MVTIVGVRFK PAGKIYYFDP GDLPIEKGAD VIVETTRGIE CGRVVVGPKQ VAEDDVVLPL 
KEVMRIATEA DRAVVEENRR RAKQAMGVFR EKVAKHGLEM KLVDAEYTFD RNKLIFYFTA 
DGRVDFRELV KDLASVFRVR IELRQIGVRD EAKILGGIGP CGRLLCCSTW MGEFDPVSIR 
MAKDQSLSLN PSKISGLCGR LMCCLKFEND AYHDQDAMA