Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0117 |
Symbol | |
ID | 8423583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 134749 |
End bp | 136443 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645026227 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003183570 |
Protein GI | 258510136 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTCGC CCGGATCGGG TACGGCCAAA CTGGCTCGCG GAACCTCTCT GTACGTGATC TGCGTGGCCC TGGCGAAGGT GTTGGGGCTG GTCTGGGTCA TTCCCGTGAC CGCGATCATC GGACCGACAG GCAACGGCAT CTATGGAAAC GCCTATGCCG TTTACAATAT TCTTCAGCAA CTTGCAACCG CGGGCTTCCC GCTCGCCATG GGGAAACTCA TCGCCGAGCG CAGAGCGCAA GGAGAACGCG CGGTGGTGGA ACACATTTAC CGCGTGACGA TGCGCTCCCT CATGATCTTC AGCGTCTGCG CTTTCGCGAT CATGTGGTTC GGAGCGCCGA TTTTCGCACA CATGGTCTCG CTCAAGGACA GCGCGGCGTC CGTGGAACAG AACGTGCCGA GTCTACGCGC GGTGTCGCTC ATGCTGCTCG TCATCCCCGC GATGAGCGGG CTGCGCGGTT ATCTGCAGGG TTTTCAGCGC CTCGAAGGGC CCGCGTATTC GCAGACATTC GAACAGTTGT TCCGCGTCAT CGCGATGGTG GTAGGCGCCT ATCTCGTGGT GGACGTGTGG CACCGGGATC GCGCGGTGTA TGGCGCGGCT GCGGCGACCT TCGGAGGGTT TGTGGGCGGA CTCGCGGGCC TCATTCTGCT CGTGGCTTTT GCAATTCCGA TTCGCAGGCG CGAGCGTCCG CTGGGCTACG ACGACAGCCC ATTTCGCAGC GGGCAGATCC TGCGCATGGT GTATCGCATT GCGCTTCCCG TCAGCCTGGG CGGCTTGGTC GTTCCCATCG CCAACCTGGT CGATTCGTGG ACGGTGACCA ATCTTCTCCA AGTGAGCGGC GAAAGCTACG CCCAGGCGGT AGCCAACTAC GGCATCCTGA CGCGCCAGGC GATGTATCTC GTCATGTTGC CGATGTCGTT CGCATACGCC ATCGGTGTAT CGGTGTTACC CAGCGTTTCA GCAGCGAAGG CGAAGCGAAG CCAGGCGGAC CTGCAGATGA ACATCACGTT CACGCTGCGA ACGATGTTCC TCATGAGCTT CCCCACGTCG GCTGCGCTGC TTGTCCTGAG TCGCCCCATC AACCTGGCCC TGTTCGGGAC GACCGCCGGA TCGGACATCA TCTCGACGGT TTCGTTCATG AGCATCTTTG CCAGCATGGA ACTGATCTCC ACGTACGTGC TGCAGGGCCT CGGCAAGATG TACCGCCCCG TGCGGAACAT GTTCCTCGGC CTCGGCATCA AAACCGTTCT CAACTTCGCG CTGATTTTGA GCTTGCACAA CGCGCTCGGC GCGGCCCTTG CCACGACATT CGGATACATT GTCTCTTCTC TCCTCAACGT GGCCGCGGTG CGCAAGTACG GTCAGGTGCG ATTCTCGCTG CGCCGTCTCA TGCGGCCCTT TTTCCGATCG GCGCTCGTCG CCGCCATCGC CATGTTTGGC GCGGACTACG GACTCGGGCG GTTGCTGCAT GCGGGGCAAG GCGTGGAGGG ACGGTTGGCG GCCGTGATCG AGCTGGTGGT GGCGGGTGGC GTGGGCGCGC TCGTCTACCT GCTGCTCGTG GCGCGATCCG GCGCGATGAC GGAGGAAGAG TTTCGCAGCG TGCCGGGCGT CGGCAAGTAT CTCGGCAAGA TGGCGCGCAG ATTGCGCAAG CCGCCCCGGC GGCCTGGCAC GGAGCGGCTA CGCAAGTACC CATAA
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Protein sequence | MNSPGSGTAK LARGTSLYVI CVALAKVLGL VWVIPVTAII GPTGNGIYGN AYAVYNILQQ LATAGFPLAM GKLIAERRAQ GERAVVEHIY RVTMRSLMIF SVCAFAIMWF GAPIFAHMVS LKDSAASVEQ NVPSLRAVSL MLLVIPAMSG LRGYLQGFQR LEGPAYSQTF EQLFRVIAMV VGAYLVVDVW HRDRAVYGAA AATFGGFVGG LAGLILLVAF AIPIRRRERP LGYDDSPFRS GQILRMVYRI ALPVSLGGLV VPIANLVDSW TVTNLLQVSG ESYAQAVANY GILTRQAMYL VMLPMSFAYA IGVSVLPSVS AAKAKRSQAD LQMNITFTLR TMFLMSFPTS AALLVLSRPI NLALFGTTAG SDIISTVSFM SIFASMELIS TYVLQGLGKM YRPVRNMFLG LGIKTVLNFA LILSLHNALG AALATTFGYI VSSLLNVAAV RKYGQVRFSL RRLMRPFFRS ALVAAIAMFG ADYGLGRLLH AGQGVEGRLA AVIELVVAGG VGALVYLLLV ARSGAMTEEE FRSVPGVGKY LGKMARRLRK PPRRPGTERL RKYP
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