| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0111 |
|---|
| Symbol | |
|---|
| ID | 8423577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 128976 |
|---|
| End bp | 130529 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 645026221 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003183564 |
|---|
| Protein GI | 258510130 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA GTCGATGGTT CAGTGCGTTC GCAGCGATGT CGCTCGTGGG GATGGTTACC
GGATGCGGAC AAATGGAAAC CTTACCCGCG TCGGCCAACT CCCCTGCTTC TGAGGCCGCT
GATGCTCGCA TGACGACGCT CACGGTCGGT CTGCAGGCGG ATCCAGCCAC ACTCGATCCA
GCGCTCTCAA GTGCTCTCGT CGACCGTCAG GTAATGGCCA ACATTTATGA CACGCTCTTC
TCCCTCACAC CGAGCGGAAA AATCGTCCCG AATCTCGTTG AATCGTATTC CGTGTCCAAG
GACGGCCTTG TATACACATT TCAGCTCCGA CGAGGTATCA AATTTCAGGA TGGAACACCG
TTCAACGCAG AGGCAGTTAA GTTTAACTTG ATGCGTGATA TGTCCCCTAC ATCTGCAAGA
AAAAGCGAGC TCTCCTCTAT CGCGAGCATC GAAACTCCGG CGACGTATAC GGTTGTCATA
CATCTCTCGC ATCCTTATAG TCCTCTGCTC GCTGTCCTGA CGGATCGCGC TGGCATGATG
GTTTCGCCGA CGGCAGTGAA GAAAGAAGGG GCCAACTATG CTGACCGTCC CGTTGGAACA
GGGCCATTCA TGTTTTCCAG TCGTGTGAAA GGCGACCACA TCACACTGAT TGCGAATCCG
CATTATTGGA AAGGTAAGCC AAAACTGAGT GGGGTTACAT TCAAAATTTT CACAGATCCG
AATGTCGAAA TCACCAATCT GGAAAATGGG AGCATCCAGC TTGCGGACCA GGTTCCATCG
CAACAACTTC CTATTCTCGA AAAGAACTCG AATTTCGTGG TCTCAAACAA ACCTGGTATT
GGGTATCAAG GGATTTATTT AAATGTATCC CAGCCGCCAT TTAACAACAA ATATTTGCGC
TTAGCTGTCG ATGCGGCCAT CAATCGTTCG CTACTCGTGA ATGTCGCATT GAAAGGAGAG
GCGACTCCTG CTTGGGGGCC ATTCAGTCCT GAATCTCCCG TCTTTGACCG TGCCCTGGAT
CTGCCGCCTG CGCCAAACTC TCAGCTCGTG GGGAAGTACT TGAAGGAAGC TGGAGATCCA
AATGGCTTCA GCTTCACGCT CCAAACGGCA AATAATCCTG TTTCGACTGA AATCGCGCAG
ATCGTGCAGA GCATGCTCCA GCCCTATCAC ATCCAGATGA ATATTCAGCA ACTTGAGTTC
GGAACGTTGC TCGCGAACAA CACCAACCAC GACTTTCAGG CATCGGCCTT AGGGTGGTCG
GGGCGCATTG ATCCGGATAA CAACGCTTAT CAGTTCTGGC ACACGGGCGG GGCGCAAAAC
GGCTCGAATT TTAGCGACCC GACAGCGGAT AAGTTGCTCG ACGAAGCTCG CGAGACATTG
TCAATGACAC AAAGAAAAGT CTACTACGAT GAATTTGTTC AAGAATTACA CCGTCAGGAT
CCGTATATTT TCCTTTACTT CCCAAATAAC ACGTACGCGT ACACAAAGCA GTTGCATGGA
TTCCAATCGT ATCCGGATGG TGTGTTCCGT CTGTACTCCA TGTGGCTCTC GTGA
|
|---|
| Protein sequence | MKRSRWFSAF AAMSLVGMVT GCGQMETLPA SANSPASEAA DARMTTLTVG LQADPATLDP
ALSSALVDRQ VMANIYDTLF SLTPSGKIVP NLVESYSVSK DGLVYTFQLR RGIKFQDGTP
FNAEAVKFNL MRDMSPTSAR KSELSSIASI ETPATYTVVI HLSHPYSPLL AVLTDRAGMM
VSPTAVKKEG ANYADRPVGT GPFMFSSRVK GDHITLIANP HYWKGKPKLS GVTFKIFTDP
NVEITNLENG SIQLADQVPS QQLPILEKNS NFVVSNKPGI GYQGIYLNVS QPPFNNKYLR
LAVDAAINRS LLVNVALKGE ATPAWGPFSP ESPVFDRALD LPPAPNSQLV GKYLKEAGDP
NGFSFTLQTA NNPVSTEIAQ IVQSMLQPYH IQMNIQQLEF GTLLANNTNH DFQASALGWS
GRIDPDNNAY QFWHTGGAQN GSNFSDPTAD KLLDEARETL SMTQRKVYYD EFVQELHRQD
PYIFLYFPNN TYAYTKQLHG FQSYPDGVFR LYSMWLS
|
|---|
| |