Gene Aaci_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0108 
Symbol 
ID8423574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp126939 
End bp127538 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID645026218 
Productrecombination protein RecR 
Protein accessionYP_003183561 
Protein GI258510127 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGGGT ACCCGGAGCC GGTGGCGCGG GCCATCGAAC ATTTCATGAA GTTGCCCGGC 
GTTGGGCCGA AGACTGCCGC GCGCCTGGCA TTTCACGTGC TGGAGATGAG CGAGGCCGAC 
GTTAAAGCCT TCGCCAAGGC GCTGATCGAT CTCAAGACGG GGCTCACAGA GTGCGCCGTC 
TGCTGCAACA TCACGGAAGC GTCTCCGTGC GCCATCTGCC GAGACCCACG CCGAGACCGG 
CGCGTCATCT GCGTCGTGCA GGAGCCGCGG GACGTGATCG CGATGGAGCG CACGCGCGAG 
TATCATGGGC TGTACCACGT GCTGCACGGC GCCATCTCGC CGATGGAGGG CGTGGGCCCG 
CAGGACATTC GGATTCGGGA ACTGGTGACG CGAGTGGGCG AGAACGAGAT TGAGGAAGTC 
ATCCTCGCCA CCAACCCGAA CGTCGAAGGC GAGGCGACGG CGATGTACAT CTCGCGCCTG 
TTGAAGCCGT TCCAGGTCAA GCTGACGCGC ATCGCGCATG GCTTGCCGGT GGGCGGCGAT 
CTCGAGTACG CGGACGAGGT CACGCTCGCG AAGGCCCTCG AGGGCAGGCG GGCGCTGTAG
 
Protein sequence
MYGYPEPVAR AIEHFMKLPG VGPKTAARLA FHVLEMSEAD VKAFAKALID LKTGLTECAV 
CCNITEASPC AICRDPRRDR RVICVVQEPR DVIAMERTRE YHGLYHVLHG AISPMEGVGP 
QDIRIRELVT RVGENEIEEV ILATNPNVEG EATAMYISRL LKPFQVKLTR IAHGLPVGGD 
LEYADEVTLA KALEGRRAL