| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0056 |
|---|
| Symbol | |
|---|
| ID | 8423518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 70814 |
|---|
| End bp | 72508 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645026162 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003183509 |
|---|
| Protein GI | 258510075 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGG GGCGGTTTTC GATCGCGGCG AGATCGGCCA TCAAAGCAGA GATGGCCGGC
GAGCCGTTGG ATCTGCTCAT CATCGGCGGC GGCATCACGG GGGCGGGCAT CCTGCTCGAT
GCGACGGCGC GGGGCATGAA GGCGGCCCTC GTCGAGATGC AGGACTTCGC CGCAGGCACG
TCCAATCGGT CGACGAAGCT CGTGCACGGC GGCCTGCGGT ATCTGAAGCA GTTTGAGGTG
GGGCTTGTGG CCGAAGTGGG CAAGGAACGC GCCATCGTCT ACGAGAACGG CCCGCACATC
ACGACGCCCG TGTGGATGCT GTTGCCCATC ATCGAGGGCG GCACGTACGG GTGGCTGGCG
ACGAGCGTGG GCATCTACAT CTACGACAAG CTCGCGGGCG TCAAGCGATC CGAGCGGCGC
AAGATGCTGA GCGCCGAGCA GGCGCTTGAG ATCGAGCCGC TGCTGCGCCG AGAGGGACTG
AAGGGCGCCG GCTATTATGT CGAATACCGG ACGGACGACG CGCGCCTCAC GCTTGAGATT
CTGAAGAAGG CGGTGGAGAT GAGCGGGCTT GCGCTCAACT ACGCGAAGGC CACCGGCTTC
CTCTACGATC ACGGCCGCGT CGCGGGTGCC GAGGTCGAAG ACGTGCTCTC CGGCGAGACT
TTCATCGTTC GGGCGAAGAA GGTCGTCAAC GCCACCGGCC CCTGGGTCGA TGAACTCCGG
GAGAAGGACG GATCGAAATC CGGCAAGACG CTGCACCACA CCAAGGGCGT GCACATCGTG
GTGGATGGCA AGCGGTTTCC GCTGCGCAAT TCCGTGTACT TCGACGTGCC CGATGGGCGC
ATGGTCTTCG CCATTCCGCG CGACGGCAAG ACCTACATCG GCACCACCGA CACGGATTAC
CACGGCGATC TCGTCCATCC GCGCATGACC AAGGCGGATC GCGATTATCT CATCGACTGC
GTGAACTCCA TGTTCCCAAG CGTCAAGCTG ACGGCGGCGG ACATCGAGAG CAGTTGGGCG
GGCGTTCGGC CGCTCATCCA CGAGGAAGGC AAAGATCCGT CCGAGATCTC GCGCAAGGAC
GAGGTGTTTG TCTCGCCGTC CGGGCTTCTC ACCATCGCGG GTGGCAAGCT CACCGGCTAC
CGCAAGATGG CCGAGAAGGT GGTCGACATG GTGGCGCGCG ATCTCGCCGA AGACGGCCGG
CGCTTCGGAC CGTGCACCAC GGACAAGATC CCGTATTCGG GCGGGGATTT CGGCGGATCG
GACAAGATGC CGGCGTTTGT CGAGGATCGC GTGCAGCGCG GCGTGAAGCT CGGCCTGGCG
GAGGAGGACG CGAGGCGCCT CGCCCGCCGC TATGGCACCA ACGTCGATCT CGTCTTCAAC
CTGCTCGCGT CCGGGCGCGA TCGCGCAGAG GCGCATGGGC TGAGGCTGGA TGTGTACGCG
GAATTGGAGT ACGGCCTGCG GCACGAGATG GTGGCGACGC CGTCCGACTT CTTCATCCGT
CGGACGGGCG CGCTGTACTT CGACATCGAC TGGGTGCGGG AGAACCAGAA CGCCGTCATC
CGGTACATGG CGGCGGCGTG CGGCTGGAGC GAAGAAGAAA CCGAGCGGCA CGCGCGGGAA
CTCCAAGCGC GCGTGCTGGA GGCAACCACG GTGGAAGAAG ACATCCCCGC ATCGGGCAAT
CTCGTGGGGG CGTGA
|
|---|
| Protein sequence | MAEGRFSIAA RSAIKAEMAG EPLDLLIIGG GITGAGILLD ATARGMKAAL VEMQDFAAGT
SNRSTKLVHG GLRYLKQFEV GLVAEVGKER AIVYENGPHI TTPVWMLLPI IEGGTYGWLA
TSVGIYIYDK LAGVKRSERR KMLSAEQALE IEPLLRREGL KGAGYYVEYR TDDARLTLEI
LKKAVEMSGL ALNYAKATGF LYDHGRVAGA EVEDVLSGET FIVRAKKVVN ATGPWVDELR
EKDGSKSGKT LHHTKGVHIV VDGKRFPLRN SVYFDVPDGR MVFAIPRDGK TYIGTTDTDY
HGDLVHPRMT KADRDYLIDC VNSMFPSVKL TAADIESSWA GVRPLIHEEG KDPSEISRKD
EVFVSPSGLL TIAGGKLTGY RKMAEKVVDM VARDLAEDGR RFGPCTTDKI PYSGGDFGGS
DKMPAFVEDR VQRGVKLGLA EEDARRLARR YGTNVDLVFN LLASGRDRAE AHGLRLDVYA
ELEYGLRHEM VATPSDFFIR RTGALYFDID WVRENQNAVI RYMAAACGWS EEETERHARE
LQARVLEATT VEEDIPASGN LVGA
|
|---|
| |