Gene Aaci_0050 details

Gene Information

• Locus tag: Aaci_0050
• ID: 8423512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
• Kingdom: Bacteria
• Replicon accession: NC_013205
• Strand: +
• Start bp: 62582
• End bp: 63133
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 645026156
• Product: glycerol-3-phosphate responsive antiterminator, GlpP
• Protein accession: YP_003183503
• Protein GI: 258510069
• COG category: [K] Transcription
• COG ID: [COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCGT TCGAGGGCCG GCGCGTGCTG CCCGCCGTGC GCAGCCTGAA GGACTTCGAG 
GAGCTCATGC AGGGGCCGCA TCCGGTCGTG GTGCTCTTGG AGACGAATCT CACTGCGCTG 
CCGAGCTTGA TGCGCATGGC GAACAAGGCC GGCAAGCGGC TCATCCTCCA TGCGGATCTG 
ATCCAGGGGC TGAAGCACGA CGAGGCGGGC ACCCAGTTTT TGTGCCAGAT GATCCGGCCA 
TATGGCATCA TCTCTACGCA TGCGAGCGTG ATCGCGACGG CGAAGAAGCA GGGCGTGATC 
GCCATCCAGC GCGTGTTTCT CATCGATTCG CACAGCCTGC GCACAAGCTA TCGCGTGTTG 
CAGCAGGCGA AGCCGGACTT CCTGGAAGTT CTGCCTGGCG TGGTGCCGCA GCTCATTGCG 
GAGATTCGTG AGCAGACGGG CCTGCCCGTG CTCGCGGGGG GATTTGTGCG GACGAAGGAG 
GACGTGGAGC GGGCCGTCGC GGCCGGCGCG ACGGCGGTGA CCACCTCCGT GAAGGCGCTG 
TGGCAGCTGT GA 

 

Protein sequence

MNPFEGRRVL PAVRSLKDFE ELMQGPHPVV VLLETNLTAL PSLMRMANKA GKRLILHADL 
IQGLKHDEAG TQFLCQMIRP YGIISTHASV IATAKKQGVI AIQRVFLIDS HSLRTSYRVL 
QQAKPDFLEV LPGVVPQLIA EIREQTGLPV LAGGFVRTKE DVERAVAAGA TAVTTSVKAL 
WQL