Gene Aaci_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0040 
Symbol 
ID8423502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp50942 
End bp52591 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content72% 
IMG OID645026146 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003183493 
Protein GI258510059 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTGGC GCACCTCGTG GCACACCGCG GCCGGCACGG CCGTGCTCGC CGCGGCCGCC 
GCGGTTCTCT GCGTTTACCC TGTGTTCGAT CTCGCCGTTG AACTCCCGTC GGCGGCGGTC
CTCGCCTCGA CCCTCGGCCC GCTGTGGAAC GCTCTGTGGA CGAGCGCCGT ATCGAGCGCC
ATCGCGAGCC TCGTCGGCAT GGCCTGGGCC GTAATGCTCT CCGGGGCCGT ACGCAGGGGG
CGCGCGGCCC TTCACGCCAT CAGCCTCCTG CCCCTGTGGA CGCCCCCGTT CATCGGCGCG
TTCGCACTCG GCGACGCGTA CGCCCGGGCC GGCCTCCTGG ACCAATGGGC GCACGTCCAC
GTGGGCTGGC TGTACGGGCC GTGGGGCGTC ACGGCGGCCC TCGCCATCCA CGCGGCCCCC
ATCGGCTATC TGAGCGGCCT CACGGCCATC GCGGCGATGA ACGTCGAACC CATGTGGGCC
GCGCGATCGT GCGGGGCCGG CTGGTTCCGG GCGTTCTGGG CCGCGTTTCG GCCGGTGGCG
CTGCGGCCGC TTTGCGCCGC CTGGGCGCTC TCGTTCGCGT TTGCCCTGGG CGACTTCGGC
GTCCCCTACG AACTCGGCGA GCCAAGCGGC TTTCGCACGG CGGCCACCTC CATCTTCGCC
AACCTGTCCA CGGGCGGCAC GCAGGGATTC ACGGCCGCCA CGTGGCAGGC GTTTGAACTC
ATGGCCGTCG GCGCGCTGGC GGTGACCGTG AGCCGAGGGG TCATGCGGTT TGATCCCGGC
CTCGGCACGT CTGCCCCCGG CGCACCGCCG CTGCCCCTGT TCCCCAAGCG CGCTCGCGCG
ATTTCGCTCG CCGCATACGC GCTGTACGTG GCGACGACGA GCGGCCTGCC GCTCGCCGCC
CTTGTGCTCA CCGCGCTCAC GCGAGCCTAC GGCCTGCCGC CCACGCCCAG GAACTGGGAC
GCGGCAGGAC TCCTCTCGCC GCTCGTCAGC GCGTGGCCCG CACTCGTGCA CACGGTCGTA
CTCGCAACTG TGGCCGCCGC CGTGATCGCC TTGCTTGGGC TTGTCGCCGC GGAGGCCGTG
CCTGCGTCCG CGATGGCGCG GGCGGCCCAT CTCGCCCTCT GGCTCCAGTA TGCGGCGCCT
GGAACGGCCG TGGCCGTCGC CATCCTGGTG GCGTTCGGGC ACGCGCTGTA CGGCACGTGG
TGGATCCTAG GTCTTGCCTA CGTGGCGAAG TTCTACGGCC TCGCCGACGC CATCGTGGCA
GCTCGCCGGA ACGCGCAGCT GGACCCGTGG CGCGCGGCGA GATCGTTTGG CGCAGGGCCT
GCGGGGGCGT ATGGTGCGGC GATTTGGCCC GCCATCCGAC CCGCGGTGCG CCAGGTGGCG
CTGCAGGCGC TCATGTCCGG GTTGTACGAG GTGACGCTCG CGAGTTTGCT TTACGGCCCG
AACACCCAGA CCATCGCCGT GGCCGTGCTG TCCGCGAGCG AAGGCGGCGA TGTCCGTACG
GTCGCGGTCC TGGCCGTGTG GATGACGGCC GCGAGCTTCG CCCTGGGACT CTTGGCGCTG
CGCGAACCGA AAAGGCGGCG AAGCCAGGGC CTGTCGCAGC TTCGCATGGC CATGCCGGCC
GCACCCCTCG AGGAGGTGAA GCTCGGATGA
 
Protein sequence
MMWRTSWHTA AGTAVLAAAA AVLCVYPVFD LAVELPSAAV LASTLGPLWN ALWTSAVSSA 
IASLVGMAWA VMLSGAVRRG RAALHAISLL PLWTPPFIGA FALGDAYARA GLLDQWAHVH
VGWLYGPWGV TAALAIHAAP IGYLSGLTAI AAMNVEPMWA ARSCGAGWFR AFWAAFRPVA
LRPLCAAWAL SFAFALGDFG VPYELGEPSG FRTAATSIFA NLSTGGTQGF TAATWQAFEL
MAVGALAVTV SRGVMRFDPG LGTSAPGAPP LPLFPKRARA ISLAAYALYV ATTSGLPLAA
LVLTALTRAY GLPPTPRNWD AAGLLSPLVS AWPALVHTVV LATVAAAVIA LLGLVAAEAV
PASAMARAAH LALWLQYAAP GTAVAVAILV AFGHALYGTW WILGLAYVAK FYGLADAIVA
ARRNAQLDPW RAARSFGAGP AGAYGAAIWP AIRPAVRQVA LQALMSGLYE VTLASLLYGP
NTQTIAVAVL SASEGGDVRT VAVLAVWMTA ASFALGLLAL REPKRRRSQG LSQLRMAMPA
APLEEVKLG