Gene Aaci_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0039 
Symbol 
ID8423501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp49866 
End bp50945 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content70% 
IMG OID645026145 
ProductABC transporter related 
Protein accessionYP_003183492 
Protein GI258510058 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATT CGAACGCGCA TCGCCTCTCC GCGGCCGGCG TCACGGTGGC GCACGGCCAG 
CAGGTGGCGG TCAGACGCGC GTCGCTGACC ATTGGGGCGG GCGAGATCGT CGCGCTCGTC
GGGCCGTCTG GCTCGGGCAA GAGCACGCTT CTCGGCGCCA TCGCGGGGTT TTATCCCATT
CAATCGGGCG CCATCTGGAT TGGCGAGGAG ATGGTGGCCT CGCCCACGCT CTCGCTTCCG
CCGGAGCGCA GGCGGGTTGG CATGGTGTTT CAGTCGCACG CGCTCTGGCC GCAGTGGATG
GTGGTGGACA ACGTGGCCTA TCCACTGCGC AGGCGGGGCA TGGCGCGCCT TCTGGCGCGG
CGCGAGGCGG AATCGGTGCT CGCCGCGGTG GGCATGGACG CGTTTGCCGC GCGCTATCCG
TCGGAACTCT CCGGCGGCCA GCGCCAGCGC GTCGGGCTCG CGCGGGCGCT CGCGTCGAGG
CCGGAGCTGT ACTTGTTCGA CGAACCCACC GCGAGCCTCG ATCCGGCCAA CCGCGAAACC
TTCATGCACG AGGTGCGGGA GCGGATTCGA CAGACGGGGG CGGCCGCGCT GTACGTGAGC
CACCAAGCGG ACGAGGCGCT GTCTTTGGCG CACCGCGTGG CCGTCATGAT GCACGGGGAG
ATCCTGCAGG TGGGATCTCC CGCGGAGGTG TACGAGAACC CGCGCACGGC CGAGATCGCC
CGGCTTTTGG GGCCGGCCGC GTGCGCGACG GGCGTGGTGC GCGAGGTGAA CGGGAGCGGG
CAGGCGCTTG TGCAAATCGC GGACAGCGAG CAGACGGTTC GACTGACGTC CGCGCCGCGC
TCGGCCGATC TCGGCCGCAG GACGCTCATG ATGAGGCCGG AGTGGTGCGA ACTCACCGCC
GACGACGAGG CGTCCCTGCC TTGCCGCGTG GTGCGCGTGC AATACGTGGG GCACCGGACG
CTGTACGAAC TCGAGTCCCT CGCCGGGCGG CTCTTGGCGA GTCACGTGGG CCCGCCGCAA
TACCAGGAAG GGCAGCGCGT GGGGTGGAAA GTGCGGCGCG CCTGCGTGAT GGAAGGATGA
 
Protein sequence
MKDSNAHRLS AAGVTVAHGQ QVAVRRASLT IGAGEIVALV GPSGSGKSTL LGAIAGFYPI 
QSGAIWIGEE MVASPTLSLP PERRRVGMVF QSHALWPQWM VVDNVAYPLR RRGMARLLAR
REAESVLAAV GMDAFAARYP SELSGGQRQR VGLARALASR PELYLFDEPT ASLDPANRET
FMHEVRERIR QTGAAALYVS HQADEALSLA HRVAVMMHGE ILQVGSPAEV YENPRTAEIA
RLLGPAACAT GVVREVNGSG QALVQIADSE QTVRLTSAPR SADLGRRTLM MRPEWCELTA
DDEASLPCRV VRVQYVGHRT LYELESLAGR LLASHVGPPQ YQEGQRVGWK VRRACVMEG