Gene Aaci_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0033 
Symbol 
ID8423495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp45683 
End bp46753 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID645026139 
Productbasic membrane lipoprotein 
Protein accessionYP_003183486 
Protein GI258510052 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGC GGATTTGGCA GAGCGGCCTC TCCATCCTGG CCGCGGCCGC CCTCGTCGTG 
GGGTGCGGCA CCAACAACTC GTCGAGCGCT ACCAACACGT CCAACAACGG CAGCACGGGC
AACACCACCT CGACGAGCGG CAAGACCATC AAGGTCGGCC TCGTGACCGA CACCGGCGGC
TTGAACGACA ACAGCTTCAA CCACCTGGCG TACGTCGGCA TGCAGGAGGC GCAGAAAGAG
CTGCCCAACA TCCAGACGAG CGTCGTCCAG TCCCAATCCG AGTCGGACTA CGTCCCGAAC
CTCAGCCACT TCGCGCAGGA TGGGTACGAT CTCGTCATCG CCGTAGGCTA CCTCATGGCG
GACGCGGTGC AACAAGTGGC CAAGGAATAC CCAAAGACGC ACTTCCTCAT CATCGACGAT
AGCATCACAG GCATTCCGAA CGTGGCGAGC GCCATCTTCC AGTCGCAGCA GGCCGGTTAT
CTCGCGGGCG TGGTCGCCGG CATGGTGCAG AAAAATCATC TTCTGAAGAA CATCAACAGC
CACAACACCG TCGGCGTGGT CGGAGGCCAG GAGATCCCGC CGGTGGATAC GTACATCGCG
GGCTTCCAGC AGGGGTTCCA CAGCGTCGAT CCGACGGGCA AGGTCATTGT CGAATACACC
AACTCGTTCA GCGATGAGGC GGCGGGCAGC CAGTACGCGC AAAACGAAAT TGCGCAGGGC
GCCGACATCA TCTTCCCGGT GGCTGGCGGC ACCGGCATCG GCTCCATTAA AGCCGCGCAG
AGCGCGAAGG TCTACGCCAT CGGCGTGGAC ACGGACCAGT CGTATCTCGC GCCCGGCACC
GTCATCACGA GCGCCATCAA GCGGGTGGAC ACGTCCGTGT TTGACACCAT CAAGGCCGTG
CAGGACGGCA CCTTCAAGAG CGGCGTGAAC ACCTTTGATC TTGCGAACAA CGGCGTCGGC
ATTGCGCCGC TCATCTCGGG CCTGCCGAAG TCGGTGACGG ACGCGGTCAA CCAAGCGAAA
CAGGAGATCC TAAGCGGCAA GATTCAGGTA TCCGCCACCG TGCAGAAGTG A
 
Protein sequence
MQKRIWQSGL SILAAAALVV GCGTNNSSSA TNTSNNGSTG NTTSTSGKTI KVGLVTDTGG 
LNDNSFNHLA YVGMQEAQKE LPNIQTSVVQ SQSESDYVPN LSHFAQDGYD LVIAVGYLMA
DAVQQVAKEY PKTHFLIIDD SITGIPNVAS AIFQSQQAGY LAGVVAGMVQ KNHLLKNINS
HNTVGVVGGQ EIPPVDTYIA GFQQGFHSVD PTGKVIVEYT NSFSDEAAGS QYAQNEIAQG
ADIIFPVAGG TGIGSIKAAQ SAKVYAIGVD TDQSYLAPGT VITSAIKRVD TSVFDTIKAV
QDGTFKSGVN TFDLANNGVG IAPLISGLPK SVTDAVNQAK QEILSGKIQV SATVQK