Gene Aaci_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0030 
Symbol 
ID8423492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp42063 
End bp42980 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID645026136 
Productinner-membrane translocator 
Protein accessionYP_003183483 
Protein GI258510049 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTCT CCAACCCCGA AATTTGGGCG CTGACCTTGT CCATGGCGAT CCCGCTCGCG 
CTCCCGGCCG TCGGCGGCAC GTTCTCGGAG CGCACGGGCG TTGTTAACAT CGCGATGGAA
GGCATCATGC TCATCGGCGC GTTCTTCGGC GTCGCATTCT CGTACTGGAC CGGGAACGCG
TGGATCGGGC TTCTGGCCGC CATCGTGTGC GGCGCACTCA CCGCGCTCGC GCTCGCCTGG
GGCGCGATTC ACGTGTCCGC CGACCAGACG GTGCTCGGCA TGGGCATCAA CATCTTCGCC
GCGGGCCTGA CGACGTTCTT GCTCAACACG CTCTTCGGAT ACAACGGCAC CCCCGTGAAC
ACGCCGAAGC TGCCGTCGGT GAGCATCCCG GGCCTGGATC GCCTTCCGTA CATCGGCGTG
ATTTTCACGA ACCAGAGCGT GCTCGTGTAC ATCGGGATCG TCCTGATTTT CCTGTCTCAC
TGGTTCCTGT TCTCCACGCG ACTCGGCCTG CGGATGCGAT CCGTCGGCGA GAATCCGCTC
GCGGCGGACA CGCTCGGCAT TCCGGTGTGG CGGCTGCGGT ACTTCGGCGT GGTCTTGAGC
GGCGTGTTTT CCGCCATCGG CGGGGCGTAT TTGTCCATCG GCATTCTGAA CGGGTTCACG
TCCAACATGA CGAGCGGCCG CGGGTACATC GCGCTCGCTG CGATGATCTT CGGCAAGTGG
ACGCCGCTCG GATCGTTCGG CGCGGCGCTC ATCTTCGGTT TTTCCACCGC GCTCGGCATC
GTGCTGCAAG GCCATGGCGT GTCGTCGAAC ATTCTGCAGA TGATCCCGTA CGCGTTGACC
ATTCTCGCGC TGACCGGGCT CATTGGCCGA TCCACGCCAC CAGCGGCGGA TGGCATCCCG
TACGAACCGC GGAGATAA
 
Protein sequence
MVFSNPEIWA LTLSMAIPLA LPAVGGTFSE RTGVVNIAME GIMLIGAFFG VAFSYWTGNA 
WIGLLAAIVC GALTALALAW GAIHVSADQT VLGMGINIFA AGLTTFLLNT LFGYNGTPVN
TPKLPSVSIP GLDRLPYIGV IFTNQSVLVY IGIVLIFLSH WFLFSTRLGL RMRSVGENPL
AADTLGIPVW RLRYFGVVLS GVFSAIGGAY LSIGILNGFT SNMTSGRGYI ALAAMIFGKW
TPLGSFGAAL IFGFSTALGI VLQGHGVSSN ILQMIPYALT ILALTGLIGR STPPAADGIP
YEPRR