Gene Aaci_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0029 
Symbol 
ID8423491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp40643 
End bp41866 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content62% 
IMG OID645026135 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003183482 
Protein GI258510048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAT ACGGGTGGTA CCGACGTCGC AGTCTGGCAC TGTTGATGGT GGCGGATGGG 
ATTTCGGTCT TGGGCGATCA GGTGGGCTGG ATGGGGCTTT TGTGGTCCAC GATGACCCTG
ACCAAGAACG CGCAGATCAT GGGATGGCTG GGGCTTGCCT TCGGCCTGCC AGCCGTCGCG
CTCGGCCCCA CCGTTGGGCA CGTCTTGGAC CACACACCGC ACAAACGGGC GCTCATCACA
TCCCACGTCA TGCTCGGCGC TTTGTTCGCA TCCATCGCCG TGCTGGAACG TCTGCACGTG
CTTCCTGTGT GGGCGCTTCT GATGTTCGCG ATTGCGGCAG GCTGCCTTAC GCCGTTTTCG
ACCATCGGCT GGAGCGTCGT CATTCCAAAT ATTGTCGCGG ATGATGAGCT TGGCTCCGTC
AATGCGCTCA TGGAGATCCT GTGGAACGGC GCAGCCATTC TGGGACCGGC CCTTGGCGGA
TTCGCCATCG CGCGCGTAGG TAGCTCCGCG GCCTTGTTCG CGGACGCAAT TTCGTTTTGG
CTCGCGGCGC TATGTGTTGG AATGGCGAAG GTACCCGCGC AGGCGAGGCA TGCGCCGATG
ACGAAGTGTC AAGTGGCGCG ATCGTTTGTG CAAAACACCC TCGAGGCCAT GAAGACGTTG
TACGCGCTGC GTCCGGTCTG GTGGATCACC ATCGGCGCGT GGGCGCTCAA TCTGGCGTAC
GGCGCGCTTG ACATCGAGTT ACCTCTCCTG ACACACCGAC AGTTTGGTCG AGGTGCCTGG
ATCCTAGGCA GCCTTTGGTC CACCTATGCC ATCAGCTCCA TTGCTGGAGC GGCGTTCAGT
GGCTGGATGT CCAAGAGACG CAGGACCGGC GTAGTCATGG CGATGATGAT CATCGGATGG
GGCGCGGCGT TCGCGCCGCT GTTCTGGATC CACGCCTTCA CGCTCATCTA CGTGTTCCTC
GCCTGCGCCG GACTCCTGTT TGGCGGGTAT CCACCGCTGG CGCGGACCGT CGTCCAGCGC
TCTGTGCCGA CGCAGGTCAT GGGACGCATC ATGGGCCTAC GGGGCTCACT GATTGCACTT
GGTCCGCCTC TCGGCTCGTG GGTCGGCGGC GTGTTGGATA GATGGCTCAG TCCGTCGGAC
GCCATCTCCC TGGTCGGTAT GGCCGTTGTG GCACTCGGAT GCTGGCTTGG CTCACGGAGT
GACTTTTGGA GGATAGAAGC TTAA
 
Protein sequence
MRTYGWYRRR SLALLMVADG ISVLGDQVGW MGLLWSTMTL TKNAQIMGWL GLAFGLPAVA 
LGPTVGHVLD HTPHKRALIT SHVMLGALFA SIAVLERLHV LPVWALLMFA IAAGCLTPFS
TIGWSVVIPN IVADDELGSV NALMEILWNG AAILGPALGG FAIARVGSSA ALFADAISFW
LAALCVGMAK VPAQARHAPM TKCQVARSFV QNTLEAMKTL YALRPVWWIT IGAWALNLAY
GALDIELPLL THRQFGRGAW ILGSLWSTYA ISSIAGAAFS GWMSKRRRTG VVMAMMIIGW
GAAFAPLFWI HAFTLIYVFL ACAGLLFGGY PPLARTVVQR SVPTQVMGRI MGLRGSLIAL
GPPLGSWVGG VLDRWLSPSD AISLVGMAVV ALGCWLGSRS DFWRIEA