Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0022 |
Symbol | |
ID | 8423484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 29487 |
End bp | 30161 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645026128 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003183475 |
Protein GI | 258510041 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAGC GAATGGACCA GTGGTTGACC GAGTTGGTGC GTCTAAACGA GGATGACCGC GTGACCGACC GACAATTGAA CATCTTACGC GCGGCGGTGG AAGTGTTCGC GGAGAAGGGT TTTGCTGCTG CGTCCACGAG CGAGATCGCA CAGCGGGCAG GCGTGGCCGA AGGCACCATC TTCAGACACT ATAAGACAAA GAAGGATTTG CTTCTTTCCA TCACGGTACC GGTGATCGAT GAATTTGTCG GACCGTTCTT GCTCCGAGAT CTCGAGACCA TTCTTACTGC CCAACACGAA CGGTTTGAAG ACTTTCTACG AGCCGTATTG TTTAACCGCT TGCAATTTGC AAAGAAATAT GCTCAAGTTC TGAGGATTTT AGCTCAAGAA ATACCTTTTC ATCCCGAGTT GAAGGCGCAA CTCAAGCAAT ATGTCACCGA GAATGTGTTG AAGCGCCTAG TCGGGATTAT TGAACACTTT CAGGAAAAAG GGGAGATTGC GCGGATTCCC GCGCGGACTG TGATCCGGCT AACGGTGTCA GTCATCCTAA GCCATGTGGT GTTGCGTCAC ATCCTGTTTC ACGATGCACC CTGGCGAGAT GATGAGGAAA TTGAGATGAC TGTTCGTTTC ATTGTGCAGG GTTTAAGGCC GGACGCGAGC AGAGACCAGA AATAA
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Protein sequence | MSERMDQWLT ELVRLNEDDR VTDRQLNILR AAVEVFAEKG FAAASTSEIA QRAGVAEGTI FRHYKTKKDL LLSITVPVID EFVGPFLLRD LETILTAQHE RFEDFLRAVL FNRLQFAKKY AQVLRILAQE IPFHPELKAQ LKQYVTENVL KRLVGIIEHF QEKGEIARIP ARTVIRLTVS VILSHVVLRH ILFHDAPWRD DEEIEMTVRF IVQGLRPDAS RDQK
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