Gene Aaci_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0016 
Symbol 
ID8423477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp21114 
End bp22826 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content68% 
IMG OID645026122 
ProductABC transporter, ATPase, predicted 
Protein accessionYP_003183470 
Protein GI258510036 
COG category[R] General function prediction only 
COG ID[COG3044] Predicted ATPase of the ABC class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.579046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCGC TGCGGCGCCA CCTGCAATCC ATCGACGGCC GCGGGTACAA GGCGTATCAG 
GACCTCGAAG GGCGTTACGC CTTCCCTTCG TTCACCCTCG CCGTCGATCA CGTCCAGGGC
GATCCGTTCG CGGATCCGTC CAAGGTGCGG GTTCTTGTGC TGCGGGGCAA GACCGCCGTC
GGGGACGCGT GGATCGATGC GCCTTGGCGC CGAATCCGGT GTGAAGACCT CTTGGCGCGG
CGGATGGACG AGGCGCTGCG CCGCTTGCCG AATCGGGCAC GCGGGACGGG GAAAAGTGGG
CTTATCGCCA TCGACGCGCC GGGGCAGAAG GTGCTGGAGC GAACGGCGGT GCAGATTGGG
CGGGACGAGA TCGTCATCTG CCTGTCCGTC GGTCTGCCGG CCGTCGGCAG GCGCGTGTTG
GCGCGGGAAG CCGAGGCGAT GCTCTTCGAG CAGATTCCCG CAGCCGTGGA GCGCGCCGTG
TACGGCCTGC GCGAGGAGGA GATCCGCCCC GCGGTGGAAC TGGCGGATCA GCAGGAGGCC
ATTCGCCGGT ATTTGCGCGA TCACGGCCTC GTGGCTTTTG TCGCCAACGG CTCCATCCTG
CCGCGCGAGA GCGGCGTGAG CGACAAGCCG CTGCGCCGGG GCGCGGTGCC GTTTCAGAGC
CCGCCCGAGT TGGAGATCTC CATCCCCGTG CCGCACCGCG AAGAGCCGCT TCGAGGCATG
GGCATCCGCC GCGGCATCAC GCTCATCGTC GGCGGCGGCT TCCACGGCAA GACGACGCTC
CTCGAGGCGC TGGAGCATGG CGTGTACGAT CACGTCGCGG GCGACGGGCG CGAGTTCGTC
ATCACCGACA GGGGCGCGGT CAAGATCCGC GCCGAAGACG GGCGGAGCGT GGCCCAGGTC
GACATCTCTC CGCTCATCGG CACGCTTCCG CATGGCAAGG ACACGACGCG CTTCTCGACG
GAGGACGCGA GCGGGAGCAC CTCGCAGGCG GCAAGCCTCG TCGAGATGAT CGAGGCGGGC
GCCACGGCGT TTCTCATCGA CGAGGACACG AGCGCGACGA ACCTCCTCGT CCGCGATGCG
CGCATGCAGG CGCTGGTGGC GAAATCGGGC GAGCCCATCA CGCCCTACGT CGACAAGGCG
AGGCAGCTGT TCGACGAATA CGGCATCTCC ACCGTGCTCG TCGTCGGAGG ATTGGGTGAT
TACTTCGACA TCGCCGACTG CGTCATCAAG ATGGAGGCGT ACGTCCCGCA CGATGTGACC
GCGGAGGCCA AACGCGTGGC TGCCGCCATC CCCACCGCCC GCAAGCCGGA AGGTGGGCAT
GCGTTCGGGG CCATCCGCCA GCGCGTCCCC CAGCCCGACA GCCTCAACAG CCAGCGGGGC
CACAAGGCGA AGGTGGCGGC GCGCGGGCGA TATGCCATCC AATATGGCGC CACGGAGATC
TCCCTGCACG CGCTGGAGCA ACTCGTCGAC GACAGCCAGA CGCGCGCCAT TGCGGCGGCC
CTCTCGTACA TGGAGCGGAA GGGCTGGCTG ACGAAGGCGC TCACGGTTCG AGAGATCCTC
GACGCCATGG AGGCGCAGTG GGATCGGGAC GGGCTGGGAT CCATCTCTCT CCGCCAAGGC
CATCCGGGCG ATCTCGCCCG CCCACGCCGG TACGAGCTCG CAGCCGCGCT CAATCGGCTG
CGGACGCTGA GGTGTGAGCA GCGGAGCGAA TGA
 
Protein sequence
MEALRRHLQS IDGRGYKAYQ DLEGRYAFPS FTLAVDHVQG DPFADPSKVR VLVLRGKTAV 
GDAWIDAPWR RIRCEDLLAR RMDEALRRLP NRARGTGKSG LIAIDAPGQK VLERTAVQIG
RDEIVICLSV GLPAVGRRVL AREAEAMLFE QIPAAVERAV YGLREEEIRP AVELADQQEA
IRRYLRDHGL VAFVANGSIL PRESGVSDKP LRRGAVPFQS PPELEISIPV PHREEPLRGM
GIRRGITLIV GGGFHGKTTL LEALEHGVYD HVAGDGREFV ITDRGAVKIR AEDGRSVAQV
DISPLIGTLP HGKDTTRFST EDASGSTSQA ASLVEMIEAG ATAFLIDEDT SATNLLVRDA
RMQALVAKSG EPITPYVDKA RQLFDEYGIS TVLVVGGLGD YFDIADCVIK MEAYVPHDVT
AEAKRVAAAI PTARKPEGGH AFGAIRQRVP QPDSLNSQRG HKAKVAARGR YAIQYGATEI
SLHALEQLVD DSQTRAIAAA LSYMERKGWL TKALTVREIL DAMEAQWDRD GLGSISLRQG
HPGDLARPRR YELAAALNRL RTLRCEQRSE