| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0012 |
|---|
| Symbol | |
|---|
| ID | 8423473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 17733 |
|---|
| End bp | 18617 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645026118 |
|---|
| Product | pyridoxal biosynthesis lyase PdxS |
|---|
| Protein accession | YP_003183466 |
|---|
| Protein GI | 258510032 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.399865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATG TCGGCACGGA TCGCGTGAAG CGCGGTATGG CGGAGATGCA GAAGGGCGGC
GTCATCATGG ACGTCGTCAA CGCGGAACAG GCGAAGATCG CGGAGGCGGC CGGCGCCGTC
GCGGTCATGG CGCTGGAGCG GGTTCCGTCG GATATCCGCA AAGCCGGCGG CGTAGCCCGT
ATGGCCGATC CGGCCATCAT TGAAGAGGTC ATGAACGCCG TCTCCATCCC GGTCATGGCG
AAGTGCCGCA TTGGGCACAT CGTGGAGGCG CGCATTCTCG AGGCGATGGG CGTCGACTAC
ATCGACGAGA GCGAGGTGCT CACGCCGGCC GACGAGAAGC ACCACATCGA CAAGACGAAG
TTCACCGTTC CCTTCGTCTG CGGCGCGCGC GATCTCGGCG AAGCGCTGCG CCGCATCGCC
GAGGGTGCGT CGATGATCCG CACCAAGGGC GAGCCGGGCA CGGGCAACAT CGTCGAGGCT
GTGCGCCATC AGCGCATGAT GCAGTCCGCC ATTCGCCGCG TTCAGGCGAT GTCCGAGGAC
GAGTTGTACG CCGAGGCGAA GAATCTCGGC GCGCCGTATC ATCTTCTCAA GCAGGTGCAC
GATCTCGGCC GCCTGCCGGT CGTCAACTTC GCGGCGGGCG GCATCGCGAC GCCCGCCGAC
GCCGCGCTCA TGATGGAGCT CGGCTCGGAC GGCGTGTTCG TGGGATCCGG CATCTTCAAG
TCCGAGAATC CAGAGAAGTA CGCGCGCGCC ATCGTCCAGG CCGTGACGCA TTATCAGGAT
TACGAACTGT TGGCGCACCT GTCCAAGAAC CTCGGGCAGG CCATGCAGGG CATCGATCTC
GCCACCTTGC GCGAGGAGGA GCGCATGGCG GTTCGCGGTT GGTGA
|
|---|
| Protein sequence | MSNVGTDRVK RGMAEMQKGG VIMDVVNAEQ AKIAEAAGAV AVMALERVPS DIRKAGGVAR
MADPAIIEEV MNAVSIPVMA KCRIGHIVEA RILEAMGVDY IDESEVLTPA DEKHHIDKTK
FTVPFVCGAR DLGEALRRIA EGASMIRTKG EPGTGNIVEA VRHQRMMQSA IRRVQAMSED
ELYAEAKNLG APYHLLKQVH DLGRLPVVNF AAGGIATPAD AALMMELGSD GVFVGSGIFK
SENPEKYARA IVQAVTHYQD YELLAHLSKN LGQAMQGIDL ATLREEERMA VRGW
|
|---|
| |