Gene Aaci_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0006 
Symbol 
ID8423464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp6202 
End bp8664 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content64% 
IMG OID645026109 
ProductDNA gyrase, A subunit 
Protein accessionYP_003183460 
Protein GI258510026 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACG AGAGCAGCTC TCGCGGCATC TTGCCGGTGG ATATCAGCCA GGAGCTGCGC 
AATTCGTTTC TTGATTACGC GATGAGCGTC ATCGTCGCTC GGGCCATTCC GGACGTGCGC
GACGGCCTGA AGCCTGTGCA TCGGCGCATC CTGTACGCGA TGTACGAGGC AGGCATGACG
CCGGACAAGC CGTACAAGAA GTCGTCGCGC ATCGTCGGCG ACGTGCTGGG TAAGTTCCAC
CCGCACGGCG ACGCCGCGGT GTACGAGGCC TTGGTGCGGC TGGCGCAGGA TTTTTCCACG
CGTTATCCGC TCATCGACGG GCACGGAAAC TTCGGATCCA TCGACGGCGA TGCGGCCGCG
GCGATGAGGT ACACCGAGTC GCGCATGTCC GCCATCGCGC TTGAACTCCT GCGGGACATC
AACAAGGAGA CGGTCGATTT CATTCCCAAC TACGACGAGC AGGAAGAAGA GCCCGTCGTC
CTGCCGTCCC GCTTCCCGAA CCTTCTCGTC AACGGATCGA GCGGTATCGC CGTCGGCATG
GCGACGAACA TCCCGCCGCA CAACCTGCGC GAGGTGATCG ACGGCGTCGT CATGCTGATC
GACCATCCGG ACGCGACGCT CGACGACCTG ATGACGGTCA TCAAGGGTCC GGACTTTCCG
ACGGGCGGCG TCATCTTAGG CCGCGAGGGC ATTCGAAAGG CCTACGAAAC GGGCCGCGGT
TCCATCACGG TGCGCGCGGT CACGCACTTC GAGGAGCTTT CCGGCGGCAA GACGCGCATC
GTGGTGACGG AGATCCCGTA TCAGCAGAAC AAGGCGCGCA TCGTGGAGAA GATCGCGGAA
CTCGCGCGCG AGAAGAAGAT CGACGGCATC ACGGATCTCC GCGACGAGAG CGATCGGCGC
GGCATGCGCG TCGTGATCGA GCTGCGCCGC GACGTGCGCC CGCAGGTGGT GCTGAACAAC
CTGTTCAAGC ACACGGCCCT GCAGACGAGC TTCGGCGTCA TCAATTTGGC GCTCGTGAAC
GGCGAGCCGA AGGTGCTCAC GCTTCGCGAG ACGCTCGAAC ACTATCTGAA TCATCAGCGA
GACGTCGTTC GCCGCAGGAC GCAGTACGAT CTCGCCAAAG CCGAGGCGCG CGCCCACATC
CTGGAGGGCC TGCGTATCGC ACTCGATCAC CTGGACGAGG TCATCTCGCT CATCCGAAGC
TCACGCACCG TCGACGAGGC GCGCCAGGGG CTCATCTCGA CGTTCGGGCT GTCGGAGGAG
CAGGCCCAGG CCATCCTGGA CATGCGCCTG CAGCGGCTGA CGGGCCTCGA GCGGGAGAAG
ATTGAGGCGG AGTATCAGGA GTTGCAGCAG CGCATCGCCG AGCTCAAAGC CATCCTCGCC
GATCCGAAGC TCTTGGACGG CGTGATCCGG CAGGAGATCC TGGAGATCAA GGAGCGGTTC
GGCGACGAGC GGCGCACGCG GATCGTGAAC GCCGAGGGCG AGATCAGCGA AGAGGATCTC
ATCCCGGTGC ACGACGTCGT GATCGCCATC ACCCACCGCG GCTACATTAA GCGGCTGCCG
CTCTCCACGT ACCACAGTCA GCGCCGCGGC GGGCGGGGGA TGACGCTCAT CAACGCGCAC
GAGGAAGACT TCGTGACCGG GCTGCACGTG ACGTCGACGC ACGACTACTT GCTCTTCTTC
ACGAACCGCG GCCGCATGTA CGCCATCAAG GCCTACGACG TGCCCGAGTT CGGCCGGCAG
GCGCGCGGAA CGCCCATCGT GAACCTGCTC AACATCGAGC AGGGCGAGAA GGTCACCGCG
ATGATCCCGG TGAAGTCGCT CGATCCGGCC GAGATCGGCG ATACGTACCT GTTTTTCGCC
ACGCGCCAGG GCATCGTGAA GAAGACGCCG CTCGCCGAGT ACTCGAACGT GCGCAAGAAC
GGGCTCATCG CCATCAACCT TCGCGACGAC GACGACCTCG TCGGCGTGAA GCTGACGGAC
GGCACGAAGG AGATCATGAT GGTCACGCGC AACGGGCTCG CCATCCGCTT CCCGGAGACC
GATGTGCGCC CGATGGGCCG CGCCGCGACC GGGGTCAAGG GCATCTCGCT CAGCGAAGGC
GACGAAGTCA TTGCGATGGA TGTGGCGGAG GACGATCACG ACGTGCTCGT CGTCACGTCC
CGCGGCTACG GCAAGCGCAC GCCGGTGAGC GAGTATCGCG CGCAGTCGCG CGGCGGCAAG
GGCATCAAGA CGCTCAACTG CACGCCGAAG AACGGGCATG CCATCGAGAT GTGCATGGTG
ACGGAAGACG ACGACGTGAT GATCGTGACG CAGGCCGGCG TGGCCATCCG CATCCACGTG
CGCGACGTGT CCACCCTGAG CCGGAACACG CAGGGCGTGC GGCTCATCAA CGTCGACGAA
GGCGTCGAGG TGGCCTCCGT CAGCCGCGTG GTCAAGGATG ACGACGAGGA TTCGGAGCCG
TGA
 
Protein sequence
MADESSSRGI LPVDISQELR NSFLDYAMSV IVARAIPDVR DGLKPVHRRI LYAMYEAGMT 
PDKPYKKSSR IVGDVLGKFH PHGDAAVYEA LVRLAQDFST RYPLIDGHGN FGSIDGDAAA
AMRYTESRMS AIALELLRDI NKETVDFIPN YDEQEEEPVV LPSRFPNLLV NGSSGIAVGM
ATNIPPHNLR EVIDGVVMLI DHPDATLDDL MTVIKGPDFP TGGVILGREG IRKAYETGRG
SITVRAVTHF EELSGGKTRI VVTEIPYQQN KARIVEKIAE LAREKKIDGI TDLRDESDRR
GMRVVIELRR DVRPQVVLNN LFKHTALQTS FGVINLALVN GEPKVLTLRE TLEHYLNHQR
DVVRRRTQYD LAKAEARAHI LEGLRIALDH LDEVISLIRS SRTVDEARQG LISTFGLSEE
QAQAILDMRL QRLTGLEREK IEAEYQELQQ RIAELKAILA DPKLLDGVIR QEILEIKERF
GDERRTRIVN AEGEISEEDL IPVHDVVIAI THRGYIKRLP LSTYHSQRRG GRGMTLINAH
EEDFVTGLHV TSTHDYLLFF TNRGRMYAIK AYDVPEFGRQ ARGTPIVNLL NIEQGEKVTA
MIPVKSLDPA EIGDTYLFFA TRQGIVKKTP LAEYSNVRKN GLIAINLRDD DDLVGVKLTD
GTKEIMMVTR NGLAIRFPET DVRPMGRAAT GVKGISLSEG DEVIAMDVAE DDHDVLVVTS
RGYGKRTPVS EYRAQSRGGK GIKTLNCTPK NGHAIEMCMV TEDDDVMIVT QAGVAIRIHV
RDVSTLSRNT QGVRLINVDE GVEVASVSRV VKDDDEDSEP