| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_3090 |
|---|
| Symbol | |
|---|
| ID | 8417426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3591222 |
|---|
| End bp | 3592955 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645026070 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003183421 |
|---|
| Protein GI | 257792815 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACGA CCCAAATCGA CGATCTGGTA GGGCGGCCGA CCGGCGTGAA GACGCAGGCT
TTCCTGTACG TGCTGTGCGG CCTGGCGGAG GCGGCCGTGT ACGTGGCGCT GCTTCCGCTG
CTGCGCTCGC TGATAGCGGG CGACTACGTT GCGGCGGGGT ATCTGGTGGC GCTGGCTGCG
GCGCTGGCGC TGTTGCATTC CGTGATCGGC TTTTTCGCGG ACAATCGCGG CTACTATATC
GGCATCGAGC AGATCTGCCA TGCGCTGCAG GACGCCTTGG GCGACCATAT CGTGCGCCTG
CCGCTGGGGT GGTTCACGAA AGAGCGCTCG GGGCAGGTTG CGGCTCTGCT CACCAAGGAG
CTGCAGATGG CCATGGACGT GCCTAGCACG TTTTTGCGCC AGATGGTGAT CGCCGTCACC
ACGCCGGCTG CGGTGGTGGT GTTGTTCCTG TTCGTGGATT GGCGCATCGG CCTGGTGTTC
GTGATTGCGG CTCCGCTGCT GCTGTGGGCT TCGCGCGCCA TGGCGAAGGC CGCAGGCGAA
GGCCATAGGC AGGAGGAGCT CTCGAACGCT GAAGTGGCGG CCCGGGTGTT GGAGTTCGCG
CACGCTCAGC CCGTTTTGCG CGCGACGAAG CGTTCGGTGG AGGGCTGGGA CGCTTTGCAG
CAGGCCATCG AGCGGGACCG TGCGGCGACG GTTGCCACCT TGCGCATGGC ATCGGCACCC
GTGGCGCGCT ACACGATGCT GATCCAGGTC GTGTTCGCCG TCGTGTTCGC AACGGCCACG
GCTCTTTTGG CCTGGGGCCA GATCGACGTG GCATCGTACG TGTTCGTAGC GGTGCTCTCC
TTGAGGCTGG TCGATCCTTT GACGCTCATC GGGTCGCAGG GGATGGCGCT GCGCGTGGCG
AAGAACGCGC TGGACGCGTC CGAGGGGATA TTGAAGACGC CCCCTCTGCC CGAAACCCGC
AACCCCCGCG TTCCTTGCGG ATCCAGCGTG GTGTTCGATC GCGTGGGCTT TGCCTACGAG
GAATCCCGTC CGGTGCTGCA AGGCGTGAGC TTGACGTGCC CCGAGCGCAG CCTGACCGCT
TTAGTGGGCC CTTCCGGCTC GGGAAAGACG ACGCTGACGC GGTTGGTCGC GCGTTTCTGG
GACGTTTCCG AGGGCAGCGT TTCGATCGGC GGGGTGGACG TGCGCGACAT GCGTCCCGAC
GAGCTCATGC AGCAGATATC CCTCGTGTTC CAGGACGTGT ACCTGTTCGA CGGAACCATC
GAGGAGAACG TGCTGGCGGG GCGCCCCGAC GCAACGCCCG AGGAGGTGCG CCGCGCCGCG
CACGTCGCGC GCCTTGACGA GGTGGCCGCC CGTCTGGAGC AGGGATGGGA CACGCCCGTG
GGCGAGGGAG GCTGCCGCCT TTCGGGCGGA GAGCGCCAGC GCGTCGCTAT CGCGCGCGCT
TTGCTGAAGG ACTCGCCCAT CGTGCTGTTC GACGAGGCCA CGGCCGCGCT CGATGCGGAA
AACGAAGCGG CCATCGTGGA GGCTATGCAC GAGTTGGCGC GCGATCGCAC GGTCATCGCC
ATAGCCCATC GCTTGTCCAC CATCGCCGCC GCAGATCAGA TAGCCGTCCT AGAGAAGGGG
TGCATCACCC AGCAGGGAAC CCACGGCGAT CTGGTGAAGG TGCCCGGCCG GTATCGGTCG
TTTTGGCGCG AGCGCCAGCA GGCGGCCGGT TGGCGGCTGG CCAGCGAGCA GTAG
|
|---|
| Protein sequence | MITTQIDDLV GRPTGVKTQA FLYVLCGLAE AAVYVALLPL LRSLIAGDYV AAGYLVALAA
ALALLHSVIG FFADNRGYYI GIEQICHALQ DALGDHIVRL PLGWFTKERS GQVAALLTKE
LQMAMDVPST FLRQMVIAVT TPAAVVVLFL FVDWRIGLVF VIAAPLLLWA SRAMAKAAGE
GHRQEELSNA EVAARVLEFA HAQPVLRATK RSVEGWDALQ QAIERDRAAT VATLRMASAP
VARYTMLIQV VFAVVFATAT ALLAWGQIDV ASYVFVAVLS LRLVDPLTLI GSQGMALRVA
KNALDASEGI LKTPPLPETR NPRVPCGSSV VFDRVGFAYE ESRPVLQGVS LTCPERSLTA
LVGPSGSGKT TLTRLVARFW DVSEGSVSIG GVDVRDMRPD ELMQQISLVF QDVYLFDGTI
EENVLAGRPD ATPEEVRRAA HVARLDEVAA RLEQGWDTPV GEGGCRLSGG ERQRVAIARA
LLKDSPIVLF DEATAALDAE NEAAIVEAMH ELARDRTVIA IAHRLSTIAA ADQIAVLEKG
CITQQGTHGD LVKVPGRYRS FWRERQQAAG WRLASEQ
|
|---|
| |