Gene Elen_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3030 
Symbol 
ID8417364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3518276 
End bp3518935 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID645026009 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003183362 
Protein GI257792756 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACT ACGCGATCGT TACCGACTTG AACCGTTGCA CCGGCTGCCT TGCGTGCACG 
GTTGCGTGCA AGGCCATCAA CGGCGTCGAC GTGGGGTCGT TCTGGATCAA GACGCTGCGC
GTCGGACCAC ATCCCATCGA GGGCGGCTCG GGCACGTTCC CGGACGTCGA GATGTACTTC
CTTCCCGTCC AGTGCCAGCA CTGCGAGAAC CCCGAATGCG TGAAGGTGTG CCCCACGGAA
GCGTCCCACA TCCGCGACGA CGGCACGGTG CAAATCGACA AGTCGAAGTG CATCGGCTGC
CAGTTCTGCG CGATGGCGTG CCCGTACGGC GTGCGCTACC TCAATCAGGA AGAGCGCGTC
GTGGAGAAAT GCACGCTGTG CGAGCAGCGT ATCTCGCAGG GCGAGCTTCC CCAGTGCGTG
GCCCAGTGCG GCGCCCGCGC CCGCTTCTTC GGCGACCTCG ATCAGGGCGT CGACAACTTC
GAGGGGCCGG CGCATCCCGA CAGCCCCGGC TGCCAGTACG AGGAGATGAC CCAGACGCGC
GTGAAGCTGA AGGACTACGT CGAGCCGTAC ACCGAAAACG ATATCCACCA TCTTGCGGAT
GTGGGCAACG AGCCGAAGCT CATGTACCTC ATGCGCGAGG GCCGAAAGTG GAGGGAGTAG
 
Protein sequence
MANYAIVTDL NRCTGCLACT VACKAINGVD VGSFWIKTLR VGPHPIEGGS GTFPDVEMYF 
LPVQCQHCEN PECVKVCPTE ASHIRDDGTV QIDKSKCIGC QFCAMACPYG VRYLNQEERV
VEKCTLCEQR ISQGELPQCV AQCGARARFF GDLDQGVDNF EGPAHPDSPG CQYEEMTQTR
VKLKDYVEPY TENDIHHLAD VGNEPKLMYL MREGRKWRE