Gene Elen_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3011 
Symbol 
ID8417345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3496439 
End bp3497257 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID645025990 
ProductSNARE associated Golgi protein 
Protein accessionYP_003183343 
Protein GI257792737 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.140642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA CCGCCCCGCT GCGAACTTCG ACCGTCACCC TGCCCCCGCT TCCTCGTACG 
CATGGCAACG CTCCCGATAA CGCGACGATC GCGACGGACC GGCGTTCCCT GCTGAAGAAG
CGCGCTGCCG TGATCGTCGG GCTGCTGGCC CTGACGGCGG GGCTCGCAGG GTTCTGCGTC
CTCTACGGGC CGGAGCTGCT TGCCTTCGTT GCCGACGCTC CGCGCTTCCG CGCCTGGGTG
GACGAAACCG GCTGGATCAG CCGCATCGTG TTCGTGCTGG CCAACATGGC GCAGGTCGTG
TTCGCGTTCC TGCCCGGCGA ACCGCTTGAG CTGGGAGCGG GCTACGCGTT CGGCTTCTGG
GAAGGCACGC TGTGGTGCCT CGTGGCCAGC GCCTTGGGAA CCGCGGCGGT CATGGCGCTC
GTCCGCGCAT TCGGAATCCG CATCGTCGGC TTGTTCTTCT CGCCCGACAA GATCACGTCG
ATGCGCTGGC TGCGCGACTC CCGACGTTTC GAAATGCTGC TGTTCCTGTG CTTTCTCATT
CCCGGGACGC CGAAAGACCT GCTCACCTAT GTGGCCGGAC TGGGATCTAG CTCCATCGGA
CGCATCGTGG CCATCACCAC GGTAGGTCGC ATCCCCTCCA TCGTCTCGTC CACGCTGGCG
GCGGGCGCGT TCGGCGACGG CAATTACCTG GGGGCGGCGC TCGTGATCGC ACTGACGGCG
GTGCTGGCCA CGGCGGGCGT GATAGCGTAC CGGCAGCTGG CGAAGCACAG CGACGCGGCC
GAGGATGCGG CCTCTAGCGC TGACGCAATG GGAGCCTAG
 
Protein sequence
MEDTAPLRTS TVTLPPLPRT HGNAPDNATI ATDRRSLLKK RAAVIVGLLA LTAGLAGFCV 
LYGPELLAFV ADAPRFRAWV DETGWISRIV FVLANMAQVV FAFLPGEPLE LGAGYAFGFW
EGTLWCLVAS ALGTAAVMAL VRAFGIRIVG LFFSPDKITS MRWLRDSRRF EMLLFLCFLI
PGTPKDLLTY VAGLGSSSIG RIVAITTVGR IPSIVSSTLA AGAFGDGNYL GAALVIALTA
VLATAGVIAY RQLAKHSDAA EDAASSADAM GA