Gene Elen_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3003 
Symbol 
ID8417336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3488418 
End bp3489692 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID645025981 
ProductCitrate transporter 
Protein accessionYP_003183335 
Protein GI257792729 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.467827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTA GCCAAATCGT TGCCGTTGCT GTGTTCGTCG TGGTCATGAT CACCATCATG 
ACCGAGAAGC TGCACCGGTC GCTCGCGGCC ATCACGGGCG CGATGATCGT GTTGGCCCTG
CATGTCATGC CGTTCGACGC GGCCATGGAG CACATCGACT TCAATACCCT GGGCGTGCTG
CTGGGCATGA TGCTGTTCGT GTCGGTAGTG AAGCTGTCGG GTGTGTTCGA GTTCCTTGCC
ATCAAGTGCG CACGACTTGC AAAAGGCGAC CCTTGGAAGA TCATGCTACT GTTCGTGCTG
CTCACGGCCG TACTTTCAGC ATTCCTGGAC AACGTGACCA CCGTGCTGCT CATCGGGCCC
ATGACGCTGA CCGTATGCAA ACTGCTCGAC GTCAACCCCA TCCCGTTCTT CATGACCGAG
ATACTCGCGT CGAACATCGG AGGCACCGCA ACGCTCATCG GCGATCCGCC CAACATCATG
ATCGGCTCGG CAGCCGGATA CTCGTTCTTC GACTTCATCC TGTACGATGC GCCCGCCGTG
GCGATTATCC TCGTCGCGAT CCTCGGCGTG TTCTACGCGC TATACGGCCG CAAGATGAAC
GTGGACGACG AGCACAAGGC CCGCATCATG GAGCTGGACG AGCACGCGCA GATCAAGAAC
CGGCGGCTGC TGAAGCAAAG CGTGGTGATG ACCGCCCTGG TGGTGGTCGG GTTCATGGCG
CATGGCGCGT TGGGGCTGGA ATCGTGCATT ATCGCGCTAG GCGCCGCGGG CATCATCATG
CTGATCTCGG GCGAAAGCAT CGAGGAAGCG CTGTCGAACG TGGAGTGGAC CACGCTGTCG
TTCTTCGCCG GCCTGTTCGT CATCGTGGGC GCGCTGGCCG AGACCGGCGT CATCGGCATG
CTGGCGAACG GGTTGATCGA CGCAACCGGC GGCAACGTGT TCATCACCAT GCTGGTGCTG
CTCATCGGCT CGGCCGTGAT CTCCAGCTTC CTGGACAACA TCCCGTTCGT GGCCACGATG
ATCCCCATCC TGCTGGCCAT GGAATCCACC GGCATGGACG TCACGCCGCT GTGGTGGGCC
GTGTCGCTGG GCGCCTGCCT GGGCGGCAAC GGCACGCTCA TCGGCGCCAG CGCCAACGTG
GTGCTGTCCG ACATCAGCAA GAAGCACGGG TACGAGATCA CGTTCGCGAA GTTCTTCAAG
ACCGGCTTCC CCATCATGCT GCTCACCATT TTGATAGCCG GCGTATACCT GGTGGTGCGC
TTCCCTCCAG CGTAA
 
Protein sequence
MDVSQIVAVA VFVVVMITIM TEKLHRSLAA ITGAMIVLAL HVMPFDAAME HIDFNTLGVL 
LGMMLFVSVV KLSGVFEFLA IKCARLAKGD PWKIMLLFVL LTAVLSAFLD NVTTVLLIGP
MTLTVCKLLD VNPIPFFMTE ILASNIGGTA TLIGDPPNIM IGSAAGYSFF DFILYDAPAV
AIILVAILGV FYALYGRKMN VDDEHKARIM ELDEHAQIKN RRLLKQSVVM TALVVVGFMA
HGALGLESCI IALGAAGIIM LISGESIEEA LSNVEWTTLS FFAGLFVIVG ALAETGVIGM
LANGLIDATG GNVFITMLVL LIGSAVISSF LDNIPFVATM IPILLAMEST GMDVTPLWWA
VSLGACLGGN GTLIGASANV VLSDISKKHG YEITFAKFFK TGFPIMLLTI LIAGVYLVVR
FPPA