| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2946 |
|---|
| Symbol | |
|---|
| ID | 8417277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3422001 |
|---|
| End bp | 3424199 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645025923 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003183279 |
|---|
| Protein GI | 257792673 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.912238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGG GTAAGGGAGC GCGCCGCGCT CGCACTGCAG GCAAGCCTGG CCAGATGGCG
GGCAAGGTTC CCGTTATCAT GCAGATGGAA GCGCTCGAAT GCGGGGCGGC CTGCCTGGCC
ATGATAGCGG CTTATTACGG TAAATGGGTG CCGCTCGAGC AGGTGCGCGC GGACTGCGGC
GTATCACGCG ACGGATCCAA GGCTTCCAAC GTGGTGCGCG CGGCTCGCGC CTACGGATTC
GAGGCCTCGG GTTTCCGTAT GCAGCCCGAG GCGCTGCGCT CGCAGGGCGT GTTCCCTTGC
ATCGTCCACT GGAACTTCAG CCACTTCGTG GTGTGCCGCG GTTTCAAGGG AGGCAAGGTG
CATCTGAACG ATCCGGCACG CGGCGAGGTG ACCGTGACGG AGGAGGAGTT CGATGCCGCC
TTCACGGGCG TCATGCTGCG CTTCGTGCCG GGTCCCGACT TCCAGCCCAG CGGCAAGCCC
CGGTCGGTAT GGGAGTTCGT TGGCCCGCGC CTACAGGGCT CGCGCGCCGC GCTCGCGTTC
GTGGCCATCA CGGCGGCGGT GACGGCCGTC GTCGGCATCA TCAATCCGGC GCTCTCCCAA
GTGTTCATGG ATCGGCTGCT GGGTGGGAAG AACCCGGAAT GGCTGTACCC CTTCATTGCC
TTGCTGATAG CCGTGGGAGC GGTGCGCATC GTGGTCGAGG TGCTGAACGC CATGTACCTG
CTACGTCTCG AGGGCAAGAT GGCGGTAGTG TCCAACTCGT CGTTCATGTG GAAGGTTCTG
CACCTGCCCA TGGAGTTCTT CTCGCAGCGC ATGGCCGGCG ACCTATCGGC TCGTGCGGCC
ACCAACACCA CCATCGCCGC ATCGCTGGTG AAGCAGTTGG CGCCGCTGCT GCTGAACTTC
GTGCTGCTGG TGCTGTACGC CGTGGTGATG GTTGCCTACA GCCCGCTGTT GGCCGCCATC
GGCATAGCGT CGGTGGTGAT AAACCTGGGC ATGGCGCGCT TGATCTCGGC GAAGCGCGTG
AATGTGACGC GAGTGCAGAT GCGCGATGCG GGCAAGCTGG CCGCCGCCAC GGTTTCCGGC
ATCGAAATGG TGGAGACCAT CAAGGCCGCC GGCGCGGAGG GCGGCTATTT CGAGCGTTGG
GCCGGCTTCC AGGCAGGTTT CAACACGCAA CAGGTCCGCT TCGCGCGCTT GGGGCAGCGA
CTGGGGCTGG TGCCCCAGCT GGTCATGCAG GTGACCAACA CCGCCGTGCT CATGACGGGC
GTGTACTTGG TGCTGCAAGG CCAGTTCACC GTGGGCATGA TCCTGGCGTT CCAAGGCTAC
CTGTCGCAGT TCATGGCTCC CGCTTCCACG TTGACGTCCG TCATGCAGAC GCTGCAGGAG
ATGCGCACCG ACATGGAGCG CATCGAGGAC GTCATGCGCT ATCCGGATGA TCCGGCGTTC
TCCCAGGCTC CGCTCGACCG CGCCGCATCG TGCGAGAAGC TCAAGGGCGC CGTGCATATG
GAGGGCGTGA CCTTCGGATA CTCGAGGTTG GAAGAACCCC TGATCAAGGA TTTCGACCTT
GATGTGGAAT CCGGACGTAG CGTGGCCTTC GTAGGCCCTT CGGGGTGCGG CAAGTCCACG
CTTGCCAAGC TGGTCAGCGG CTTGTTTCGC CCTTGGTCGG GTACGGTGAG CTTCGATGGC
TCGCCCATGG ACGAGGTGCC GCGCGAGGTG CTGACCGGGT CGGTGGCTGT GGTCGACCAG
GACATCGTGT TGTTCAACGA TACCATCGCC AACAACATCC GCCTGTGGGA CACCTCCATC
GAGGACTACG AGGTGATCCT TGCCGCGCGC GATGCCGGCA TCCACGAGGT CATCATGCAG
CGCGACGGCG GCTATAACGC CGTGTTGTCC GAAGGCGGGC GCGACCTGTC CGGCGGACAG
AGGCAGCGCT TGGAAATCGC TCGCGTGCTG GCGCAGGATC CCACCGTGCT CATCATGGAC
GAGGCGACCA GCGCGCTCGA TGCCAAGACC GAGCAGGAGG TCATGAGCGC GGTGCGCAAG
CGCGGCATCA CCTGCATCGT GGTGGCGCAT CGCCTGTCCA CCGTGCGAGA CTGCGACGAG
ATCGTGGTAT TGGACAAGGG CCGCGTGGTG GAGCGCGGCA CTCACGAAGA GCTGTGCGAG
CGCGGGGGCA TGTACCTGCA GCTGGTGACC CAGGAATAG
|
|---|
| Protein sequence | MLPGKGARRA RTAGKPGQMA GKVPVIMQME ALECGAACLA MIAAYYGKWV PLEQVRADCG
VSRDGSKASN VVRAARAYGF EASGFRMQPE ALRSQGVFPC IVHWNFSHFV VCRGFKGGKV
HLNDPARGEV TVTEEEFDAA FTGVMLRFVP GPDFQPSGKP RSVWEFVGPR LQGSRAALAF
VAITAAVTAV VGIINPALSQ VFMDRLLGGK NPEWLYPFIA LLIAVGAVRI VVEVLNAMYL
LRLEGKMAVV SNSSFMWKVL HLPMEFFSQR MAGDLSARAA TNTTIAASLV KQLAPLLLNF
VLLVLYAVVM VAYSPLLAAI GIASVVINLG MARLISAKRV NVTRVQMRDA GKLAAATVSG
IEMVETIKAA GAEGGYFERW AGFQAGFNTQ QVRFARLGQR LGLVPQLVMQ VTNTAVLMTG
VYLVLQGQFT VGMILAFQGY LSQFMAPAST LTSVMQTLQE MRTDMERIED VMRYPDDPAF
SQAPLDRAAS CEKLKGAVHM EGVTFGYSRL EEPLIKDFDL DVESGRSVAF VGPSGCGKST
LAKLVSGLFR PWSGTVSFDG SPMDEVPREV LTGSVAVVDQ DIVLFNDTIA NNIRLWDTSI
EDYEVILAAR DAGIHEVIMQ RDGGYNAVLS EGGRDLSGGQ RQRLEIARVL AQDPTVLIMD
EATSALDAKT EQEVMSAVRK RGITCIVVAH RLSTVRDCDE IVVLDKGRVV ERGTHEELCE
RGGMYLQLVT QE
|
|---|
| |