Gene Elen_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2909 
Symbol 
ID8417240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3378388 
End bp3379086 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID645025887 
ProductLrgB family protein 
Protein accessionYP_003183243 
Protein GI257792637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA TAGCGCAACT CGCACTGACA CTCGCAGTGG GAACCGTCGC CTCGTTCGCA 
GTGTTCAAGC TTTCCGTGCT GCTGTACGAG CGCGTGAAGT CGCCGCTGCT CAATCCCCTG
CTGGTTACCG TCGCGTTCAT CATCGCGGCG CTCGTGGCGC TGCGCATCCC CCTGGATTCC
TACGAGCAGA GCGTGCAGCT CATCTCGTTT CTGTTAGGAC CGGCCACCGT GGCGCTGGCA
TACTCGGTGT ACCGGCAGCG CCAGACGCTC AAGGAGCACT TCGTTCCCAT CTTCGCGGGC
TGCCTTGTAG GCTCGGTGGT GTCCATGGCT AGCGCCTACG CGCTGTGCAA GCTGCTGGGG
CTCGACGATG CGCTTGCGCT GTCGTTCATC CCGAAGTCGG TGACCACACC CATCGCCATC
GCGGTATCGC AGCAGCTGGG CGGCATCACG TCCATCACGG TGGCCGCCGT CATCGTCACC
GGCATCCTGG GCGCCATCAC CGCGCCGCTC ATGGCGCGTC TGTTCCGCGT GCGCGACGGC
ATCGCCAAGG GCGTGGCCAT CGGAACGTGC AGCCACGCGG TGGGAACGAC GAAGGCCCTT
GAGATGGGCG AGCTCGAAGG CGCCATGAGC GGCGTCTCCA TCGCCGTGTC AGGTCTGCTG
ACCACCGCCA TCGTCATCGT CGCAAGCTGT TTTCTATAG
 
Protein sequence
MDGIAQLALT LAVGTVASFA VFKLSVLLYE RVKSPLLNPL LVTVAFIIAA LVALRIPLDS 
YEQSVQLISF LLGPATVALA YSVYRQRQTL KEHFVPIFAG CLVGSVVSMA SAYALCKLLG
LDDALALSFI PKSVTTPIAI AVSQQLGGIT SITVAAVIVT GILGAITAPL MARLFRVRDG
IAKGVAIGTC SHAVGTTKAL EMGELEGAMS GVSIAVSGLL TTAIVIVASC FL