| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2874 |
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| Symbol | |
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| ID | 8417205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | - |
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| Start bp | 3334228 |
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| End bp | 3336270 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645025853 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_003183209 |
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| Protein GI | 257792603 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.681717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTATATC GAAAAGAACA CGCGATAGAG GCCTGGAAGA CGTTCGTCAG CACGGGCACC
ATCCTCGAAG ACAAGGTGCG CCCCGAAATA GCTCGCTCAT GGCTTCGATG CCGCGCCGCC
GGCGTGAACC CATGGTCGAG CGATTTCACC GAGCAGAACG TCGCGCTGCT GGAAGAGAAG
CGGCAGCGTT TCGCGGCATC GCTCAAATCG ACCGCTCCGG TGATGAAGTT TCTGAAGGAG
ATGCTGGGCT GCAACGTGTC GTTGATGGAC GGCGAGAACT TCGTGTTCGA GCTGATGTCG
CCCTTGGCGG TGTATCCGCG CACGTTCGGC ACGTTCACGC GCGAAGAGGA GGTGGGCACC
GGCAACGCCA CCCTGGTGGC CTACGAGAAG AAGCCGGTGC GCGTCGACGG GTTCGAGCAT
TATCGCGCCA TCGTGCAAAC ATATTCGGGC GTGTCGGTTC CCTACCTCGA TGCCGCGGGA
AAGTACTACG GCGCGATGAA CATCAACAGC CCGTTCGCCG TCTTGCCGCA AAGCGCGCTC
GAGCTGTGCC GCATCGGCGT CTCGTTGACG AACGACTTGC ATCGCGCCGG TGCGAAGGCG
GGCGCTTTGC TGTCCACGGT CGACTTCTTC AAACCGCTTA TGCTGGCCTA CGAGCACCCG
GTGCTTCTGA TCGACCCCAA CGGCCGCATC CTGGGCGGCA ACGCGGGCAT GCGCGCATAT
TGCCCGGGCT GGGAGCAGTA TTCGTACGGC TCGCAATCGC TCGGCGCCTA TCTGGGAAAG
GACTTCTCCG TGCAGGACGT GCTCGATCTG CCGGACAAGC TGGAGGCACC GCTGCCCATC
CGATTCAAGA AGGGGCGCTC GCGCGCGGTG CACGAGCTCA ACCTCGTGCG GCACGGCAAG
GTGGAGGTCG AAGGACAGGA GCCGTTCGTC ATGCTCGTGT TCGAAGACGG CAACGAAGCC
GAGCGCAACG CCCGCAGCGC AACCGGCCGG CGCAGCGACG CCGCAGTCAT GCCGACCGGC
GACAAGGTGG ACTACATCGG GGAAACCGAG GAGTGGAAGA AGATCGACCG CATGGTGCAG
AAGGTCGCGC CCATCAAGAC GAACGTGCTG CTGTTGGGCG AGACGGGCAC CGGCAAGGAA
GTGGTGGCCC GCGCGCTGCA TCGTCGCAGC GGACGCACCG GCGAGTTCGT GGCCATCAAC
TGCGGCGCCC TGCCGCGCGA CTTGCTGGCC ACCGAGCTGT TCGGCTACGA GGGCGGGGCG
TTCACCGGGG CGCGCGAGAC GGGCGCGGTG GGGAAGTTCG AGTTCGCGGA CGGCGGCACG
CTGTTCCTCG ACGAGATCGG CGAGATGCCG GTGGACATGC AGGTGAGCCT GCTGCGCGTG
CTGCAGGAGC AGAGCGTCAC GAAGCTGGGA TCGAACACCG CGAAGACGCT CGACGTGCGC
GTGATCGCCG CGACGAACCA GAACATCGAG CGTCTGATCT CCGAGAAGAA GTTCCGCAGC
GACCTGTACT ACCGTTTGAG CCTTGTGGAG ATCCGCCTGC CTCAGCTGCG GCGGCGCTCC
GCCGACATCC CGCCGCTGGT GGATTATTTC AACGGGCAGC TTTCCTCGGT GCTCGAGGTG
CCGTGCACGC CCTTCCCCGC CGAGACCATC GAGGCGCTGC AGGCTTACAG CTGGCCGGGC
AACGTGCGCG AACTGCGCAA CATCGTGGAG CGCTGCCTGA TCATGCAGGG CCAGGGCGCC
AACGTCACCG TGGATTCGCT GCCGCCCCAT ATCGCGAATG CGGCGAACGC CATGCCGGAC
GGCCCGGTAG CCCACGCCGC CGTGGCCGTG CAGCAGGATG CGGGGGCGAT GCGGGAGGGC
GTCGAGGACG ATGCGGTGTC GGAGGAGCGC CATCTTGTGC AGGCGCTGCT CGCGCAGCAC
GAAGGCGACC TCGCGGCGGT GGGGCGGCAG CTCGGATTGA CGCACGAAGA GCTCTCCGAG
CTGCTCAACC GCCTTCACCT GCGCGTTCGC GTGGTGCTCG AAAGCATGGA CGACGCGTTC
TAG
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| Protein sequence | MVYRKEHAIE AWKTFVSTGT ILEDKVRPEI ARSWLRCRAA GVNPWSSDFT EQNVALLEEK
RQRFAASLKS TAPVMKFLKE MLGCNVSLMD GENFVFELMS PLAVYPRTFG TFTREEEVGT
GNATLVAYEK KPVRVDGFEH YRAIVQTYSG VSVPYLDAAG KYYGAMNINS PFAVLPQSAL
ELCRIGVSLT NDLHRAGAKA GALLSTVDFF KPLMLAYEHP VLLIDPNGRI LGGNAGMRAY
CPGWEQYSYG SQSLGAYLGK DFSVQDVLDL PDKLEAPLPI RFKKGRSRAV HELNLVRHGK
VEVEGQEPFV MLVFEDGNEA ERNARSATGR RSDAAVMPTG DKVDYIGETE EWKKIDRMVQ
KVAPIKTNVL LLGETGTGKE VVARALHRRS GRTGEFVAIN CGALPRDLLA TELFGYEGGA
FTGARETGAV GKFEFADGGT LFLDEIGEMP VDMQVSLLRV LQEQSVTKLG SNTAKTLDVR
VIAATNQNIE RLISEKKFRS DLYYRLSLVE IRLPQLRRRS ADIPPLVDYF NGQLSSVLEV
PCTPFPAETI EALQAYSWPG NVRELRNIVE RCLIMQGQGA NVTVDSLPPH IANAANAMPD
GPVAHAAVAV QQDAGAMREG VEDDAVSEER HLVQALLAQH EGDLAAVGRQ LGLTHEELSE
LLNRLHLRVR VVLESMDDAF
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