Gene Elen_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2778 
Symbol 
ID8417104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3221983 
End bp3223515 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content68% 
IMG OID645025753 
ProductSuccinate dehydrogenase 
Protein accessionYP_003183114 
Protein GI257792508 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.961247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.792272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAA TCAAGACGGG ACGCACCGCC ACCGCTACCA CGGAGAGGAC GAGGGCTTCC 
ATGCCGCTGA CGCGCCGGCA GTTCGCCCAG GCGCTGACGG GCGGTTTGGC CACGATGGCG
CTGGGCAGCC TGTTCGGCTG CGCGCCGCAG CAGGCCGCGG CGGCCGAGGC GCACGAGACG
GTGGACTTCG ACGTGGTGGT TCTGGGCGGC GGCGGTGCCG GCGTGACGGC GGCGGGCCAG
GCTGCGGCCG CCGGCGCGAA AACCGTGCTG CTGGAGAAGA TGGCGTGGCT GGCCGGTTCC
AGCTCGCTGG CCATCGGCAC GTTCTACGGC GCGGGCACGC AGCTGCAGAA AGCCGCGGGC
ATCGAAGACG ATCCGTCCGG GCTGCTCGAC TACTTCCTGT CGCGCGGCGG CGACAAGCTG
GACTACGACG TGCAGAAGTT CTGCGCCGAG CACTTCGGCG AAACCATCGA CTGGTTGACA
GGCGAGCTGG GCGTGCTCTT CAAGGAGACC GTGTCGAAGA AGGGCAAGGA CCCGGTGCCG
CGCGGCCACA ACTGCGCCAA CAACGCCATG GACGCGCTGC GCGCCGTCAC GGCGTACGCC
CAGGAGCACG GCGCCGAGTT CCACTTCGGC ACCACGGTGG AATCGCTCGT GGTCGATGAC
GGCGGCGCGG TGACCGGCGT GCTCGCAAAG CGTGGGAACG GCTCGACGGT GCTCTACAAC
GCGAAGAACG CGATCGTGTC CACGGGCGGG TTCTGCCGCA ACGTCGAGAT GATCGACGAG
TACTGCCCCG ACTATTCGGG CGTGTACACC GAGGTGGGCG TCGGCTGCAC GGGCGAGGGG
CTGCAGATGG GCCTCGACAT CGGCGCGGAC TACGTGGGCC ACGGCGGCAC GAACGGCATC
CTCGCCTGTC CCGTGGAGCC GGGCCAGTCG AAGCTCATCA GCAACAAGGC GCTGTGGATC
AACTCCAAGG GCGAGCGCTT CGCCAACGAG GCCGGCCAGA CGCACGACAT CTACTACGAC
GTGGCGCACT TCGACGATCA GAAGTTTTTC GCGGTGTACG ACCAGGCCAT GGTGGACGCG
CTTGACGAGG ATCTGCGCAG CAAGCTCGAC TTCGGCTTGG AGCAGGGCAT GTTCGCGAAG
GCCGACACGG TGGCCGAGGC GGCGGCAGCG CTCGGCATCG ATGGCGCTGC GGCGCAGACG
GCGCTCGACG CGTACAACGA GCTGGCCGCG TCCGGCGAGG ACACCCAGTT CAAGAAGAAG
GCCGAGAACC TCGTCCCGCT CGCGGAGGCT CCCTTCTACG TGCTGACGAT GGGCGTGTGC
ACGCACGGCA GCTTCGGCGG CTATCGCGTG AACACCGAGT TCCAGGTGCT CGACACCGAC
GGTCAGCCCA TCCCGCACCT GTACGCGGCC GGCGAAGTGT GCTGCGGCAC GTTCATCTAC
GACGACTACC CGGCGGGCGG GTGTGGTCTG AACTGGTCCT ACACCTCCGG CCGCTTCTCG
GGCGCCAACG CGGCCAAGGC GGCGCTCGCG TAA
 
Protein sequence
MTGIKTGRTA TATTERTRAS MPLTRRQFAQ ALTGGLATMA LGSLFGCAPQ QAAAAEAHET 
VDFDVVVLGG GGAGVTAAGQ AAAAGAKTVL LEKMAWLAGS SSLAIGTFYG AGTQLQKAAG
IEDDPSGLLD YFLSRGGDKL DYDVQKFCAE HFGETIDWLT GELGVLFKET VSKKGKDPVP
RGHNCANNAM DALRAVTAYA QEHGAEFHFG TTVESLVVDD GGAVTGVLAK RGNGSTVLYN
AKNAIVSTGG FCRNVEMIDE YCPDYSGVYT EVGVGCTGEG LQMGLDIGAD YVGHGGTNGI
LACPVEPGQS KLISNKALWI NSKGERFANE AGQTHDIYYD VAHFDDQKFF AVYDQAMVDA
LDEDLRSKLD FGLEQGMFAK ADTVAEAAAA LGIDGAAAQT ALDAYNELAA SGEDTQFKKK
AENLVPLAEA PFYVLTMGVC THGSFGGYRV NTEFQVLDTD GQPIPHLYAA GEVCCGTFIY
DDYPAGGCGL NWSYTSGRFS GANAAKAALA